Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200294"

Accession numberr200294 [export]
Locus namecoat protein read-through
Recode1 namepol_r_vir_sbwmv4
Descriptionviral or mobile polyprotein
Recode statusReviewed

Organism

Genomic classViral Genome (Virus)
OrganismSoil-borne wheat mosaic virus [details]

Sequence

GenBank IDsAB033690.1,AB002813.1
SequenceRNA of 3574 nucleotides [sequence]
OrganisationSequence (1)

Recoding event

Event typeReadthrough (position: 858)
Descriptionset ratio of CP:fungal transmission proteins. SBWMV RNA2; Accession no. AB033690
GTATTATTAT CACATTACGT TGAGTGTTAA CTCTTCTTGT GAAATTACCT TTCTTACCAG GATAAGAAAT AAAATATTTT CTGGGTTGTC ACTGTTTGGA TACTTAGCGG AGATTGACAT CTCGCTATCT TAGGCCCGCA TCTTTGCGAT AAATCCTAAG TAGTCAGCTG TTAACGTGCG ACGTTGAGAG GCATTGGCAT TTCGGCTCGC TGGATAAGTT AACCAGACTT AAAGGTGAGG TCGATAGGTC ACTACAGAAG GCGGCGGATA AGGTAACTGC GGAGAGCAGT GATTTGTTGC GACCAAAGGT GGTTGTACAG TTACCTTCAA TGGCTGTGAA AAATGGTTAC ACGGGTTATA ACAAGGAGTT GAATTTGATG GCTTCTATTC ATCCTTTCAT CAGGTTGAGT ACTTTGATAA GTCAGATTGA AGGGTGGCAG GCAACACGAG CGAGCATACT TACTCATTTG GGTGTAGTAC TCAATGGGGT TAGTAAGTTG GGTGAGCGAA ATTTTTTCTC TAGACAAAAA AGGTTTGGAA CGCATACTCA AGACGGTGAT GAGATATTCT GTGATCTTGG TGGTGAAGCA GTTATGCAGA CTATCGCCAG ACTCACGGTA GCACTCCAAT CCGCAAGGGG AGAGGGTTCG CAGACCAGAA ATGCAAAGAG AGGGACAGCA CCAACTACTA ACCAGGTTGA GGGTGAAGAG CAAGGTCAGA CAGATCAGAC GTTGGCCATT TCAAATGCGC TGGCAGAATT TATGGCCTTT ATCCACACTA AAGATTTCAC GATGAATGAG TGTTATACGC AGAGCTCTTT TGAAGCTAAG TTCAATCTGA AGTGGGAAGG TACAAGTTGA CGGGACGGCG TCTCGGGAAA GTTGAGAGCC CAGATTGTCG AAGACTTCCA GAATAGGCTG GTGTTGGCTG ACGATTTGGG CGTTTTTCCC AGACGCAATC TTGATGGAGA GGTGATACGT GATGAGCCGG AAATTATATA TGCGGAACTT GAGGATAAAC TGTTGAGTTT TGAGAGTTCT GTGTATCATC CTAAGGCTGT GACAGTGGAA ACTGAAGTGG CTGTTTTACC GAAAATGCAG ATGGATCTTG AATTAGGTGT CGTTGCAGAT GATGTTGAAA TGACTGTGGT AACTGAGGTG CTCATTGATG AGGAGAGCAG TTACTTTTGG TTATATCTCT TACTCCTTCT GCTGTCGACT TTCTTATCGT GCTTTATCGT GTTATCTCGA TCCTTTATTC ATTTTCTGGG GAACAGAAGT GGTCGGGGTG GTCCTTTCTG CCGGAAAATT GCTACGTTAC TGTGGGGTGC GCGGTTGTGG CTGTTGCGCA GGGCAGCTAG GCGTTACGGC TCTCTTGGAA TCGTCAGAAA AAGGTATACG CGCGCTGGTA TGCGCAAGTA TTTGCGTGAT TACAATTTTC AGCTTGACGA GTGGGAGAGT GCGGTTGATT GCTCTCCAGG CGAAGCCTTG ATTGTTGCAG ATCAAAGAAT GTTCGTCAGA GCAGTGAACA AGGTCGTAGA TCTGGAAGGC GATTTTGATA CTGTTGAAAG TGTTAAGAGA GTTTTTCGGA TCTACAATGT GCGTAATTAC AAGGTTGAGA AATGGTTAGA CAAACATACG ATACGTTCAG CTCTTGTTGT GCTGAATAAT GTCGTAAAAG ATGACAATCT CACCTTAGGT GAAGGCATGC TGTCATTGGA AAGAGCGAGC TTTGATGACG TGTTAGGCTG TGACGTCGAG GCTCAGCGGA ATGGCATGTA CTTCAAGGAT ATTATTGCTC TTCAGTTTGC TTTTCGTCTC GTGGGCACAC CGGAATTCTC TGATTTTGTG ATAGCTTACA AAGGCAATCT ATACCCATGC TATGTTGATG CGATCAGGAG ACATAGTTTG ATTTTGGAAA AGCATCATGT TGATGAAGAT CAGAAAAAGA GGAACGAAAA GGCACTGGAG TGGCTACTCA TGGCAGGACA GGGCGCTTTT GTGTTGTCCG CTGTTGTATC GACAGGCTTT GCGGCCGTGA AGATTCATAA GTGGATTAAA AGTCGCATGC TCCTGAGAGC GTTGCAGATG CTGCCATCTG TAGGTGGCGG AGGTAACGAT GGTGGTGGTG GTTTCTCAGA AGAAGCTCTT CAAAGGTTTG CAGTAGGGCG AAACTTTGAG GAGCGTCTGG CGGCGCTGCA CACTGGTTTA GATATGGCAG CTGAGAACCT AGAGAGTTTT TCACCGGAAG ATATGCAAGT TGAGATCCAA CACGTTATTC AAGCTCACGT CGAGGGTTCT TACCATGCTG CAGATCTTCC GTTTTTAGGT AATGTGCCTA GTGCGGCTTC TGTTGTAGTG GATTCAGTTG CTGATTCCAG TAGTGTCGGC AGTGATGTGT GTAGTGCAGA CACGTCTATT TCGTTAGGCG TGGCTAGTGG TGCAAGGCGT CGTGCTGTTG CTAGTAACAC TAGGATGTAT CCAAGTGCTG GTGTTGTGAG TTACGGTAAC TTTGAGTCAC CGCGAGTTAG TGGTAGAAGT GGAATTGGTA GTATGAAGAT GAAAATCGCT AGTGGGCCTA TGGCGTCCTA GCGTACTGTT TTTCATTCTA CTCACTTTCA TTTCTATTAC GTCTTCGCGT TTTGATTTTA AAGTAATATG TCGGCCTGTG CGTTTCATTC CTGTGACAAG TGTGTTGATG GGCCCAAAAA TGTTGTGTGC GTCAGTAAGT ATCGTCACAG TGTTTATAAA GTTTTGGGTC TCACTGTTGT AAAGTGTCGT TTGCCTTCTG ACTGCGGTGT CAATTGCGGC ATGCCTGCGG CGTTTGTTCT CGAGAACGGA CATCCTAGGT TGACTCTCGA TGGATACTGC GGTGAGAAGC ACAAAGGTTA TGTGATTTCT GGTGCATGGC GCCATGCGCA ACTCCGGACT TTGAACGAAG AACTTGACAG GTTGGAAAAG AGGGAGGAGT TTTTAAAAAC TCAGATAAAG TTGCTCAGTG ATAGTGCTAA GGCCAACACT GCTCCTGTTT ACGTTCCTAA GAAGATTAAT CGTATGAAGG CGGAGGTCTG GGATGTTAAT GATAAAATTC AGGATCGTAG CGCTGCTCTT GCAGATGTTA TGGATGCTGT TGCGCTGGAT TTATCGCCTG ACAGTTCACC AAGGAAGTCT AAACCTCTGT GATGTATGTT CTGTTGAAAT ACTGTATGTG TGTATACTGG AGTAGGTAAC CAGGATAAAG AACCCTAGCG AAAATGTTTT GAAAAAATAT TCTGTATGTA TATAAATAAA TGGGCAAGTC TGTTGCTTTG GCTATAGAGT AATCATACTC TTAAAACAAT GACGTGGTCT TCACGATAGA AGATGGTGCT TGTTATTTCA CCTAAATCGA AATAACGAAA GGGCGTTCCA CAGTACGTTT AAACTGTGGG TTTCAACCTC TAGTTGCTAT TGATGTAATA TAAAAAAGAT CAATATTCGA CTATGATGAG GTGCGACTGG GTGTCGCGGC TGCTATTACA CAGCAGTTAG AAGGGGTTCA ATTCCCCCCC CGAACCGGAG GGTTATCCGG CCCA

Products

ProductCP
Descriptioncoat protein
MAVKNGYTGY NKELNLMASI HPFIRLSTLI SQIEGWQATR ASILTHLGVV LNGVSKLGER NFFSRQKRFG THTQDGDEIF CDLGGEAVMQ TIARLTVALQ SARGEGSQTR NAKRGTAPTT NQVEGEEQGQ TDQTLAISNA LAEFMAFIHT KDFTMNECYT QSSFEAKFNL KWEGTS
ProductCP-ORF2
Descriptioncoat protein, fungal transmission
Modifications858..860,aa:OTHER
MAVKNGYTGY NKELNLMASI HPFIRLSTLI SQIEGWQATR ASILTHLGVV LNGVSKLGER NFFSRQKRFG THTQDGDEIF CDLGGEAVMQ TIARLTVALQ SARGEGSQTR NAKRGTAPTT NQVEGEEQGQ TDQTLAISNA LAEFMAFIHT KDFTMNECYT QSSFEAKFNL KWEGTSQRDG VSGKLRAQIV EDFQNRLVLA DDLGVFPRRN LDGEVIRDEP EIIYAELEDK LLSFESSVYH PKAVTVETEV AVLPKMQMDL ELGVVADDVE MTVVTEVLID EESSYFWLYL LLLLLSTFLS CFIVLSRSFI HFLGNRSGRG GPFCRKIATL LWGARLWLLR RAARRYGSLG IVRKRYTRAG MRKYLRDYNF QLDEWESAVD CSPGEALIVA DQRMFVRAVN KVVDLEGDFD TVESVKRVFR IYNVRNYKVE KWLDKHTIRS ALVVLNNVVK DDNLTLGEGM LSLERASFDD VLGCDVEAQR NGMYFKDIIA LQFAFRLVGT PEFSDFVIAY KGNLYPCYVD AIRRHSLILE KHHVDEDQKK RNEKALEWLL MAGQGAFVLS AVVSTGFAAV KIHKWIKSRM LLRALQMLPS VGGGGNDGGG GFSEEALQRF AVGRNFEERL AALHTGLDMA AENLESFSPE DMQVEIQHVI QAHVEGSYHA ADLPFLGNVP SAASVVVDSV ADSSSVGSDV CSADTSISLG VASGARRRAV ASNTRMYPSA GVVSYGNFES PRVSGRSGIG SMKMKIASGP MAS

Publications