Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200295"

Accession numberr200295 [export]
Locus namecoat protein read-through
Recode1 namepol_r_vir_sdv
Descriptionviral or mobile polyprotein
Recode statusReviewed

Organism

Genomic classViral Genome (Virus)
OrganismSoybean dwarf virus [details]

Sequence

GenBank IDsL24049.1
Sequencess-RNA of 2178 nucleotides [sequence]
OrganisationSequence (2)

Recoding event

Event typeReadthrough (position: 601)
Descriptionset ratio of coat:aphid transmission proteins. SDV Accession no. L24049
ATGGTCGCGG TTAGCAATGT CGCAATACAA CGACGACGCT CTCGTAGGGC AGCAAGACGC GCTCCAAGAG TTCAGCTCAT GGCTGTTCCA ACGGCCACCA GCCGACCACA ACGCAGAGGA CGACAACGAC GACGAAGGAG AAATAATAGA GGAGGAAGCT TTGTTTCCGG AGGATCAGGC AAGGCTCACA CATTCGTGTT TTCAAAGGAC GGCATCAATG GTAGTTCCAA GGGAAGTATC ACTTTCGGGC CGTCTTTATC AGAATGCAAG CCATTCTCTG ATGGAATACT CAAGGCCTAC CATGAATATA AGATCACGAG TGTCTTATTA CAGTTCATCA CCGAGGCCTC TTCCACCTCG TCAGGTTCCA TCGCTTATGA ACTTGACCCA CACTGCAAGT ACTCCGAAAT TCAATCGCTA CTCAATAAAT TCAGTATCAC AAAGAGCGGT TCGAAACGTT TCCCAACCAG AGCTATCAAT GGCCTCGAAT GGCATGATAC CAGTGAGGAT CAATTCAAGA TCCACTATAA AGGGAACGGA GAGTCCAAGA TCGCAGGCTC CTTCAAGATC TCGATCAATG TCCTAACGCA GAATGCTAAA TAGGTAGACG GAGAACCGGG TCCGAAACCA GGTCCAGACC CAGCACCCCA ACCAACACCA ACACCTAAAC CAACGCCAGC CAAACACGAG AGGTTTATCG CGTACACCGG TACGTTGTCT ACACTCATTA GTGCTAGGCA GTCTTCTGAT AGCATCTCCT TATATTCCAT TCGGAATCAG AGGATCAGAT ACATTGAAGA TGAAAACTCC AGTTGGACAA ACATAGATGC AAAATGGTAC TCACAGAACT CTGTTGAGGC TATTCCAATG TTTGTTTATC CAGTACCTGA AGGTACTTGG TCAATTGAGA TTTCTTGTGA AGGCTACCAG GCAGCGTCTA GCACTTCAGA CCCGCATCGT GGAAAATGCG ATGGCATGAT TGCTTATGAC GACGATTCAT CCAAGGTGTG GAATGTTGGC CAGCAGAATA ATGTAACCAT AACCAACAAC AAGGCCGATA ATGATTGGAA GTATGGCCAC CCAGATCCTC TAGATCTGAT GATCAATGGT GACAGATTCG ATCAAAATCA AGTAGTCGAG AAAGATGGAA TTATCTCATT CCATTTAGTA ACTACTGGCC CCAATGCGAG TTTCTTTCTT GTCGCTCCAG CTGTTAAGAA AACAGCCAAA TACAACTTTT GTGTTTCTTA CGGGGATTGG ACAGATAGAG ATATGGAATT TGGTATGGTA TCGGTGGTGC TTGATGAGCA CTTAGAAGGT GCAAGGAGTT CTCAGTATGT TAGAAAATCG CCAAGACCAG GTCATTTTGG CGTCAATCGC TCTCACCGAT TGCAAGATAG TTTCACTCCT GTGGAATATG TCAGTGATGA TGATAGTAGT AGTAGTAGTA GTATAGTTAG CAATCGACCA TCAACTCCGG ACAATGATAG TGATATCCAG TTCGCGAATT CGTTGAAAGG TAAGCTTCCG TCTCAGACGA AACTTCCTCC CAAAGGATTC CAATCACGGT TAAGCGCAAG AGAAAAAGAA GAGATTTCAA AATCAAAGCC TTCAAATGTT GAACGTCAAG TTGGTCCTCT AGTTGATGCA TATGGATACC CTTCCCAGAC GGGTGTTTAC GATGCAGCTA GGGAGATTCT GCAGTCTAAA GAGGCTGCAG AAAACTTGGC AGAATTAGAG AAGGATCTAA AAGAAATCAA CAAGCTGGAA CCGCCGGATA CAATCGAACA GGAAGAAATC CCTGATTTCG TAGCCCCATC GGAGAGAGTG ATTGCGGAAG ATGATCGCGA TTACGTTCCT TCAATTTGGC GTAACGCCGA CCAAGCTGTG GTAATCTCAT CTTTTGAGCC TACAGATTGG AGTCGGCCAG CTTATGAGTC AGGTGATCCT CCTAAGAAGG CAGGTTTGCT CAAAGGCACC CTCTCAAAAT TGGGAGGGTC GCTTAGAAGT GGCGAGTCGT CTCTTAGAGG TAACCTCCGC AAGACGCAAG ATCAAAGTGA TCTAGAGTAC AAGTTGTCTA GACTCAATGT TCCGCAGCGA TCCCAATACC AACGGATCTT GGCGAACCTT GGGAAAGTGC GTGCGCGGGC ATATATCGAT GGTTTAGATT TAGTTTAA

Products

ProductCP
Descriptioncoat protein
MVAVSNVAIQ RRRSRRAARR APRVQLMAVP TATSRPQRRG RQRRRRRNNR GGSFVSGGSG KAHTFVFSKD GINGSSKGSI TFGPSLSECK PFSDGILKAY HEYKITSVLL QFITEASSTS SGSIAYELDP HCKYSEIQSL LNKFSITKSG SKRFPTRAIN GLEWHDTSED QFKIHYKGNG ESKIAGSFKI SINVLTQNAK
ProductCP-ORF2
Descriptioncoat protein, aphid transmission, movement
Modifications601..603,aa:OTHER
MVAVSNVAIQ RRRSRRAARR APRVQLMAVP TATSRPQRRG RQRRRRRNNR GGSFVSGGSG KAHTFVFSKD GINGSSKGSI TFGPSLSECK PFSDGILKAY HEYKITSVLL QFITEASSTS SGSIAYELDP HCKYSEIQSL LNKFSITKSG SKRFPTRAIN GLEWHDTSED QFKIHYKGNG ESKIAGSFKI SINVLTQNAK QVDGEPGPKP GPDPAPQPTP TPKPTPAKHE RFIAYTGTLS TLISARQSSD SISLYSIRNQ RIRYIEDENS SWTNIDAKWY SQNSVEAIPM FVYPVPEGTW SIEISCEGYQ AASSTSDPHR GKCDGMIAYD DDSSKVWNVG QQNNVTITNN KADNDWKYGH PDPLDLMING DRFDQNQVVE KDGIISFHLV TTGPNASFFL VAPAVKKTAK YNFCVSYGDW TDRDMEFGMV SVVLDEHLEG ARSSQYVRKS PRPGHFGVNR SHRLQDSFTP VEYVSDDDSS SSSSIVSNRP STPDNDSDIQ FANSLKGKLP SQTKLPPKGF QSRLSAREKE EISKSKPSNV ERQVGPLVDA YGYPSQTGVY DAAREILQSK EAAENLAELE KDLKEINKLE PPDTIEQEEI PDFVAPSERV IAEDDRDYVP SIWRNADQAV VISSFEPTDW SRPAYESGDP PKKAGLLKGT LSKLGGSLRS GESSLRGNLR KTQDQSDLEY KLSRLNVPQR SQYQRILANL GKVRARAYID GLDLV

Publication