Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200300"

Accession numberr200300 [export]
Locus nameORF3-ORF5
Recode1 namepol_r_vir_sugarcane
Descriptionviral or mobile polyprotein
Recode statusReviewed

Organism

Genomic classViral Genome (Virus)
OrganismSugarcane yellow leaf virus [details]

Sequence

GenBank IDsAY236971.1,AF157029.1
SequenceRNA of 2298 nucleotides [sequence]
OrganisationSequence (1)

Recoding event

Event typeReadthrough (position: 636)
Descriptionnull.
TTACCTGATA TTCCTCAAAA TCAGTGCACA CATCCGAGCG ATAGTGAATG AATACGGGCG CTAACCGCTC ACGAAGGAAT GTCAGAAGAC GCGCTAACCG TCGTAGACAG ACTCGGCCAG TGGTCGTGGT CCGGGCTCCC CCAGGACCTA GACGAGTACG ACGACGTAGA GCACGTGTTG GAGGAAACGC TGTGCGAGGA CCGGGAGGAA GAAGCAACCG GGATGTTCTC ACTTTCACGG TTGACGATCT CAAAGCCAAC TCAACCGGGA TCCTCAAATT CGGACCGAAC TTATCTCAGT ACGCAGCGTT CAACAATGGC TTACTCAAAG CCTACCATGA GTATAAAATC ACAAGTCTCA CTATTCAGTA TAACTCATGC TCCTCCGACG CAACTCCAGG TGCAATCGCA CTTGAAGTGG ATACATCCTG CTCCCAAACA ACAACAGGCT CCAAGATTAC TAGCTTCCCC GTCAAGAGGA ACGCCAAGAA AGTCTTCCCG GCCCCCTTCA TCAGGGGGAA AGATTTCATG ACTACGTCAG CTGACCAGTT TTGGTTGCTG TACAAAGGGA ATGGAGACTC GAGCCTAGCA GGACAATTCG TCTGCCGATT TGAATGCCTT TTCCAGAATC CCAAATAGGT AGGCGACGCT CCCCCAACAC CCACCCCAAC ACCAACCCCA CCCGCTCCGA CCCCGGCACC GGCTCCCAAG TATTTTGGAT ACCAAGGAGT GCCGAACAAC ATCGTGAAAA CAAGAGGAAA CTCTGAATAT CTAGATGTGG GTCCGCTCGA AAATGTGACC ATGTATCTTT GGAAAGACGA ATCGTGGAGC ATTGAGCAAC TGTCAGCCGG ATATCGCGTT AACAATCGAG AACGTGCCAT ACCCTTTGTC CTCTTTCCAG TGGATAAAGG TAAATACTCC GTGTTTATAC AATGTGAGGG CTTTAAGGCA GTTAAAGCCA AAGGAGGCAC GAACGACGGC AAGATGAGCG GGTTTCTTTG TGACAATGCA AATCTCGCGG GTTGGCGAGC ATACGCATAT AGTGGGTGTA CAATCTCTAA TTATAGAACA TCGGACTCTA ATGTTCCTGG TCATCCGGAC ATGAAAGTCA ATGGTGGATC TTTTACCGAC CAATTGGTCG AGAGAGATTT TTCTTGTTCA TTTCACCTTG AGGTGCCTCA ACAAGGCTAT TTTGGCTTAG AGGCCCCACC CATTGAAAAG AGTGATCATT TCAATTTTGT GGTGTCTTAC GCTAACTTCA CTGATAAAAT CCTGGAATGG GGTTCAATCT CTGTAGCGAT AGACGAGGTG AATGACGGAG CGTATAGTAG ATCAAAATGG GATAAGACTA CTGCAATGAG TGCTCGTTTG CCGACTCAGG TGAGCGCCCC CTCTGAGGTT TACACCCCGG AAGCACCTGA ACAACCGACT AACGAAGGGA CGGAGAGTAT GCCTCCAGCC CCGAACCCGG CACTGGGACC GGACAACCCA GCAACCAAAG AACCCACGCC CAAAATCGTG GATAATCCGG ACCCAAAGGT ACTCAACTGG CTTAACAACC AGCGAGATAA ACCTGTGGTG GAAGAGGTTT TGCGTGAATC TCCGATTTAT GCTCCTCCAC CCCCCCCGTC TCTAGTCCCG ACTCATGCCG ACACTTTAAG ACAGGCGGAT AAGGTCCGGA GAGCTCTCAT GGCTAACGCT TCACGTTCAG CCTCACCTCC CCCCACGAAC ACCGAAGTTC CTGTTCTTGG AGCCACTGAC ACCGCTTCTC TTAGTGGATC ATTACGCGGT GGCTCCCTCA GGGGTAATTT GGGTTCTCGC CCCTCTCTTC CGAGGGTCGC TGACAGCCCT CCCCGTTCTG TAAGTCCGGC TCGTTCCGAG ACCAGCACTT TACAGGGCGG TTCCCTGAGC GGTGGTTCTT TGAGAGGTGG TAACCTCCAG GCTTTGCCTG AGGCCACAAG AGAGCAAAGG AGGGAATATG AACGTCTCAA GAATTCACAA GGGAAGACGG TAGCAAAAGC CCATGCTAAA GAACACGGTT ACAAGCCACC GAAATCTTCC TCCTCCTTGT TTGGTTGAGT GTCGAGCCAC TATAACGCTC CCCGCCCCGG GACACGGGAC TCCAATCATG AGTTTAAACT GAGCTCTTTC CACGAGCCTA AACTGGAGAA CTCCGCAAAG TTCTAAAACT ATGCAGATGG GCTAGCGACC CAGCTCTTCC ATTGATTTTC AGGATCTTTG GAAGCCCAAG CTAAAGGGGT GGAATACAGG GAGGCACTGC CTCCCGTATA TCCTAGTA

Products

ProductORF3
Descriptioncapsid protein
MNTGANRSRR NVRRRANRRR QTRPVVVVRA PPGPRRVRRR RARVGGNAVR GPGGRSNRDV LTFTVDDLKA NSTGILKFGP NLSQYAAFNN GLLKAYHEYK ITSLTIQYNS CSSDATPGAI ALEVDTSCSQ TTTGSKITSF PVKRNAKKVF PAPFIRGKDF MTTSADQFWL LYKGNGDSSL AGQFVCRFEC LFQNPK
ProductORF3-ORF5
Descriptionaphid transmission factor
Modifications636..638,aa:OTHER
MNTGANRSRR NVRRRANRRR QTRPVVVVRA PPGPRRVRRR RARVGGNAVR GPGGRSNRDV LTFTVDDLKA NSTGILKFGP NLSQYAAFNN GLLKAYHEYK ITSLTIQYNS CSSDATPGAI ALEVDTSCSQ TTTGSKITSF PVKRNAKKVF PAPFIRGKDF MTTSADQFWL LYKGNGDSSL AGQFVCRFEC LFQNPKQVGD APPTPTPTPT PPAPTPAPAP KYFGYQGVPN NI

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