Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200302"

Accession numberr200302 [export]
Locus namereplicase readthrough
Recode1 namepol_r_vir_tbsv2
Descriptionviral or mobile polyprotein
Recode statusValidated

Organism

Genomic classViral Genome (Virus)
OrganismTomato bushy stunt virus [details]
AcronymTBSV

Sequence

GenBank IDsU80935.1
SequenceRNA of 2457 nucleotides [sequence]
OrganisationSequence (1)

Recoding event

Event typeReadthrough (position: 889)
Descriptionproduction of fusion protein and set the ratio between two protein products. TBSV-pepper; Accession no. U80935
ATGGAGACCA TTAAGAGGAT GATCTGGCCT AAGAAAGAGA TTTTTGTGGG TGATTTCGCG ATCGGAGTTA ATAGGACGGC ACCGGTGGAC ATTTTCCAAT TGGTGTGTCG TGTGGTTCTA AGATACATGA GGACAGGGAA AATAGACTGT GATTCTGACA GCATGACTAA GTTTATAGTT GAATTACTTA AAACTGATTG TGCTGCCAAA TGGGAGTGGT TTATGAAGAG ACGGCAGAGG GGCGACTATG TTATCCCTCT ATCTATAGCC GCCATCCCAA TCATACCGCT GTTGAGTTAT GCCACATGGG TACGCGCAGT CTCAGTCAGG GCCTTTGGGA ATGAACTTTC GTTCAATGTC AGAGTACCTA GACCATCTGT ACCTAAGAAA GGATTGCTCC TCAGACTGGC GGCAGGCCTA GCGTTCAGAC CTATATGCGC GCTGGCAGTG TACGCTACCC TACCTAGGGA AAAACTGTCG GTATTTAAGC TGAGAACCGA GGCACGCGCA CATATGGAGG ATGAGAGAGA AGCGACAGAT TGCTTGGTGG TTGAGCCGGC ACGGGAACTC AAGGGTAAGG ATGGTGAGGA TCTCATCACT GGTAGTAGAT TAACTAAGGT GATTGCGTCC ACAGGGACGC CTCGCAGGAG GCCGTATGCA GCCAAGATCG CACAGGTTGC GAGAGCTAAG GTGGGTTACC TTAAGAATAG TCCTGAGAAT AGACTAATCT ACCAGCGAGT GATGATTGAG ATCATGGACA AAGACTGCGT CAGGTATGTT GACAGGGATG TCATATTGCC ATTGGCTATT GGATGCTGTT TTGTCTATCC GGATGGAGTG GAGGAGTCGG CGGCACTATG GGGTTCCCAG GAATCCCTTG GTGTCAAATA GGGAGGCCTA GTACGTCTAC CTGGTGTTGT AACACAGATC AATCGAGATA TCCCATCTGA TGTGTTACTT CCCCAGGAGG TGCTAGAGGT TCGTGCAGGA CCTCCCAATG CTAAGGACCG TAATATATTT ATGGTTGCAG GTTGCCCATC ACAGGCACGG TTCTTAGTAC ATAATCACTG CCTGAAAAAC CTTAAAAGGG GTCTTGTGGA GAGAGTCTTC TGCGTAGAGA GAAACGGGAA GCTCGCTCGC GCTCCACAAC CTACCAAAGG AGCTTTTGGA CGTCTTTCCC CGTTCAGGAA AGCGGTTTGT GAGAAGGTTG GGGTAGCCCA CCGACTTGGG TATGATGGGT TTCTGTCATA CTACGACGGT GCGAAACTCC GTACTTACAC ACGAGCCGTG GAGAGTCTGC ATATCACACC TGTTTCCGAG AGGGATAGTC ATTTGACTAC CTTCGTGAAA GCAGAGAAGA TATCGACGTC TAAAGGTGAC CCAGCACCTC GGGTGATTCA GCCTCGAAAC CCGAGGTACA ATGTGGAACT TGGAAGATAT CTACGGCATA TGGAATCCAA GCTGATGAAA GCTGTTGATG GCGTGTTCGG AGAAACAACA TGCATCAAAG GATACTCTGC CGACGAGGTG GGTGCAATTT TTCGGGAGAA ATGGGATAGG TTTGATAAAC CTGTAGCCAT AGGTCTCGAT GCATGGAGGT TTGATCAACA CTGTTCCGTG GAGGCTTTGC AATATGAGCA TAGTTTCTAC AGGGCCATGT ACCCTGGCAA CAAGCTTTTG GGCAAGTTGT TGGAATGGCA ACTCCATAAT AAAGGTAAAG GTTATGTCCC TGATGGGACT ATAACTTATC GTAAGGAGGG TTGTCGTATG AGTGGGGATA TAAACACTTC GTTGGGGAAC TATCTGTTGA TGTGTGCAAT GGTACATGGG TACATGCGTC ATTTGGGGAT TAATGAATTT AGTCTGGCGA ACTGTGGGGA TGATTGCGTT CTCATTCTTG AGCGCAGGAA TCTTAAACAG GTGCAGAGAA CTCTGCCTGA GTATTTCCTT AATTTGGGTT ATACCATGAA GGTTGAGCGA CCTGTATTTC AATTGGAAGA GGTTGAATTT GACCAGGCAC ACCCAGTACA GTTTCAAGGG GGTTGGAAGA TGGTGGGAAA TGTCCGTACT GCTATGAGAA AAGACGTGCA CTGTGTCAAT AATATACGCG ATTTGGCGAC GAGGAGAGCT TGGAGTAATG CTCAACATCA TGGAGGGCTA GCACTTAGGG CTGGTATACC TGTGGTTGAG ACTTTTTACT CCAGGTTCAA GCTGTATGAT ACACCTCGTA AGCATCAACG CATTGACACA GTCACTAATG TTCATAAGTG GCGTGGATCG GGTGGGAGCT ATGTTGTGAC CCCTGAATCA AGAGCTAGCT TTTGGGCTGC TTTTTGCCTC ACGGGGGATG AGCAACTGGC TCTGGAGGAT CGTCTGGAGA GATGGGAGAT GGATCTATTC GGAGAGGAGG GTGTTGACGC TCATGAGCCC AGCATCCTTG ACTCCGCCGT AGCTTGA

Products

ProductCP
Descriptioncapsid protein
METIKRMIWP KKEIFVGDFA IGVNRTAPVD IFQLVCRVVL RYMRTGKIDC DSDSMTKFIV ELLKTDCAAK WEWFMKRRQR GDYVIPLSIA AIPIIPLLSY ATWVRAVSVR AFGNELSFNV RVPRPSVPKK GLLLRLAAGL AFRPICALAV YATLPREKLS VFKLRTEARA HMEDEREATD CLVVEPAREL KGKDGEDLIT GSRLTKVIAS TGTPRRRPYA AKIAQVARAK VGYLKNSPEN RLIYQRVMIE IMDKDCVRYV DRDVILPLAI GCCFVYPDGV EESAALWGSQ ESLGVK
ProductCP-ORF2
DescriptionRNA-dependent RNA polymerase
Modifications889..891,aa:OTHER
METIKRMIWP KKEIFVGDFA IGVNRTAPVD IFQLVCRVVL RYMRTGKIDC DSDSMTKFIV ELLKTDCAAK WEWFMKRRQR GDYVIPLSIA AIPIIPLLSY ATWVRAVSVR AFGNELSFNV RVPRPSVPKK GLLLRLAAGL AFRPICALAV YATLPREKLS VFKLRTEARA HMEDEREATD CLVVEPAREL KGKDGEDLIT GSRLTKVIAS TGTPRRRPYA AKIAQVARAK VGYLKNSPEN RLIYQRVMIE IMDKDCVRYV DRDVILPLAI GCCFVYPDGV EESAALWGSQ ESLGVKQGGL VRLPGVVTQI NRDIPSDVLL PQEVLEVRAG PPNAKDRNIF MVAGCPSQAR FLVHNHCLKN LKRGLVERVF CVERNGKLAR APQPTKGAFG RLSPFRKAVC EKVGVAHRLG YDGFLSYYDG AKLRTYTRAV ESLHITPVSE RDSHLTTFVK AEKISTSKGD PAPRVIQPRN PRYNVELGRY LRHMESKLMK AVDGVFGETT CIKGYSADEV GAIFREKWDR FDKPVAIGLD AWRFDQHCSV EALQYEHSFY RAMYPGNKLL GKLLEWQLHN KGKGYVPDGT ITYRKEGCRM SGDINTSLGN YLLMCAMVHG YMRHLGINEF SLANCGDDCV LILERRNLKQ VQRTLPEYFL NLGYTMKVER PVFQLEEVEF DQAHPVQFQG GWKMVGNVRT AMRKDVHCVN NIRDLATRRA WSNAQHHGGL ALRAGIPVVE TFYSRFKLYD TPRKHQRIDT VTNVHKWRGS GGSYVVTPES RASFWAAFCL TGDEQLALED RLERWEMDLF GEEGVDAHEP SILDSAVA

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