Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200304"

Accession numberr200304 [export]
Locus namemethyltransferase-helicase-polymerase
Recode1 namepol_r_vir_tmgmv
Descriptionviral or mobile polyprotein
Recode statusValidated

Organism

Genomic classViral Genome (Virus)
OrganismTobacco mild green mosaic virus [details]

Sequence

GenBank IDsM34077.1
Sequencess-RNA of 4900 nucleotides [sequence]
OrganisationSequence (1)

Recoding event

Event typeReadthrough (position: 3,404)
Descriptionset ratio of met transferase/helicase to RDRP. Accession no. NC_001556
GATGTTTTAA TAGTTTTCGA CAACAACAAT TAAAACAAAA ACAACATATT ACAAACAACA AACAACAACA ATGGCACACA TACAATCTAT AATTAGCAAC GCCCTTCTTG AAAGCGTGAG TGGTAAAAAC ACTCTCGTTA ATGACCTTGC AAGAAGGCGC ATGTACGATA CGGCCGTGGA AGAATTTAAC GCCCGCGACC GTAGACCAAA GGTCAACTTT TCCAAAACTA TTAGCGAAGA GCAAACGCTT CTAGTCTCCA ACGCGTACCC GGAGTTCCAG ATTACCTTTT ATAATACTCA AAATGCCGTA CACAGTTTGG CTGGAGGTTT GAGAGCATTA GAATTGGAAT ATCTGATGCT ACAAGTTCCC TATGGATCGC CGACATATGA TATAGGTGGG AACTTTGCAG CACATTTGTT CAAAGGCAGG GATTACGTGC ATTGCTGTAT GCCCAATCTG GACATACGAG ATATAATGAG GCACGAAGGA CAAAAGGACT CAATTGAGAT GTATTTGTCC AGATTGTCTC GTTCTAACAA GGTAATTCCT GAGTTTCAAA GGGAGGCTTT TAACAGGTAT GCAGAAGCTC CCAACGAAGT CTGCTGCTCT AAAACTTTTC AGGATTGTCG AATACATCCG CCAGAGAATA GTGGTAGAAG ATACGCTGTT GCTCTGCACA GTTTGTATGA TATTCCTGTG CATGAGTTTG GAGCTGCGTT AATATCTAAG AATATACATG TATGTTATGC AGCTTCCATT TTGGCAGAAG CATTATTACT AGACCAGACG GAGGTTACGC TTAATGAAAT AGGCGCAACT TTCAAAAGAG AAGGTGATGA TGTTTCTTTT TTCTTTGCTG ATGAAAGTAC TTTAAATTAT AGTCATAAAT ACAAAAATAT CTTGCATTAT GTAGTTAAAT CTTACTTTCC TGCTTCTAGT AGAATAGTTT ACTTTAAGGA ATTTTTAGTC ACTAGGGTTA ATACTTGGTT TTGTAAATTT ACCAAAGTAG ATACCTATAT TCTGTACAAG AGTGTTAGAC AAGTAGGGTG TGATAGTGAT CAGTTCTATG AGGCGATGGA AGACGCCTTT GCTTACAAGA AAACCTTGGC CATGTTCAAC ACTGAAAGAG CAATCTTTAG AGACACGGCT TCGGTTAACT TTTGGTTCCC TAAGATGAAG GACATGGTGA TAGTACCGCT GTTTGAGGGT TCTATTACCA GCAAAAAGAT GACAAGGAGT GAGGTCATTG TTAATCGTGA CTTCGTTTAC ACAGTGCTTA ATCATATCAG AACATATCAA GCCAAAGCGT TAACTTACCA GAACGTATTA TCTTTCGTGG AGTCTATAAG ATCCCGCGTG ATAATCAATG GTGTTACTGC TAGGTCTGAA TGGGATGTAG ATAAAGCAAT TCTTCAACCC TTGTCAATGA CTTTCTTCTT GCAGACTAAG CTGGCTGCGC TTCAAGACGA TATAGTAATG GGAAAGTTTC GGTGCTTGGA TAAGACCACT TCTGAACTTA TTTGGGATGA GGTGGGCAAA TTTTTTGGAA ACGTTTTCCC CACTATCAAA GAGAGATTGG TGAGCAGGAA AATTCTGGAT GTAAGTGAGA ATGCTCTGAA GATCAAGATC CCAGATCTGT ATGTCACATG GAAAGACAGG TTCGTAGCTG AATACACCAA GTCTGAGGAG TTACCGCATC TAGATATCAA GAAGGACTTA GAAGAAGCTG AGCAAATGTA CGACGCGTTA TCAGAATTAT CTATCCTTAA GGGTGCTGAT AATTTCGATA TCGCGAAGTT CAAAGACATG TGCAAGGCTT TAGATGTTAG TCCTGATGTG GCAGCACGAG TAATCGTTGC AGTGGCCGAG AATAGAAGCG GTTTAACTCT TACTTTTGAT AAGCCAACCG AGGAGAATGT GGCTAAGGCT CTTAAAAGCA CGGCGTCTGA GGCCGTGGTA TGTCTTGAAC CGACATCCGA AGAGGTGAAC GTAAATAAAT TTTCTATTGC TGAGAAAGGG AGATTGCCTG TGTGTGCAGA AAGTCATGGT TTGACGAATG CTAACTTAGA GCACCAGGAG TTGGAGTCCC TCAACGATTT CCATAAGGCT TGCGTGGATA GTGTGATTAC AAAGCAAATG GCATCGGTTG TCTACACTGG CTCACTCAAA GTTCAACAAA TGAAGAACTA TGTGGACAGT TTGGCAGCTT CGTTGTCCGC CACTGTATCA AATCTATGCA AGTCACTAAA GGATGAAGTC GGGTATGATT CTGATTCCAG GGAGAAAGTT GGTGTTTGGG ATGTCACTTT GAAAAAGTGG CTCCTCAAAC CTGCGGCCAA AGGTCATTCA TGGGGAGTTG TCCTGGATTA CAAGGGGAAA ATGTTTACTG CACTTCTATC TTATGAAGGA GATAGAATGG TGACTGAGAG CGACTGGAGG AGGGTGGCTG TATCATCTGA TACAATGGTA TATTCTGATA TTGCAAAGCT CCAAAATCTG AGGAAAACAA TGAGAGACGG TGAACCCCAC GAACCTACTG CAAAGATGGT ACTTGTGGAT GGGGTGCCTG GTTGTGGAAA GTACAAAGGA GATTTTGAAA GATTTGATCT TGATGAGGAT TTGATCTTGG TTCCTGGAAA ACAAGCTGCT GCTATGATCA GAAGAAGGGC TAATTCATCT GGACTGATAA GAGCCACAAT GGACAATGTG AGAACGGTAG ATTCACTTCT AATGCATCCA AAACCGCGAT CACACAAGAG GCTTTTTATT GATGAAGGGT TGATGCTGCA CACCGGTTGT GTTAACTTCC TGGTGCTTAT CTCTGGTTGC GACATCGCAT ACATTTACGG AGATACACAG CAGATTCCTT TCATTAACAG AGTTCAGAAT TTCCCGTATC CCAAACATTT TGAGAAGCTG CAAGTGGATG AAGTTGAGAT GAGGAGGACC ACACTGAGAT GCCCAGGTGA TGTGAATTTT TTCCTACAAT CGAAGTACGA AGGAGCGGTG ACAACCACTT CAACTGTACA ACGATCGGTC TCATCTGAGA TGATAGGCGG TAAGGGAGTA CTAAACAGTG TTTCCAAACC ACTAAAAGGG AAAATTGTAA CTTTCACTCA GGCTGATAAA TTTGAGTTAG AGGAGAAGGG CTATAAGAAT GTGAACACCG TTCATGAGAT CCAAGGAGAA ACCTTTGAAG ATGTGTCGCT GGTCAGATTG ACGGCAACTC CACTGACTCT GATTTCCAAG TCTTCCCCGC ATGTTCTAGT CGCTCTGACT AGACACACAA AGAGCTTCAA ATATTACACC GTAGTGTTAG ATCCTTTAGT ACAGATAATT AGTGATTTGT CTTCTTTAAG CTCCTTCCTT TTAGAAATGT ATATGGTAGA AGCAGGTAGT AGATAGCAAT TACAGATGGA TGCAGTGTTC AAAGGTCATA ATCTCTTTGT GGCAACACCT AAATCAGGAG ACTTTCCAGA TCTACAGTTC TATTACGATG TATGCCTCCC TGGTAATAGT ACTATACTTA ACAAGTATGA TGCTGTTACC ATGAGGTTAC GTGATAATAG TCTTAATGTG AAGGATTGTG TTCTTGATTT TTCCAAAAGT ATTCCGATGC CAAAGGAGGT GAAACCATGT CTAGAGCCAG TTTTGCGTAC CGCGGCGGAA CCGCCAAGGG CTGCAGGACT ACTCGAAAAT CTGGTTGCAA TGATTAAAAG AAATTTCAAC GCACCAGACC TGACGGGGAC GATTGACATT GAGAGCACCG CATCTGTTGT AGTAGATAAG TTTTTTGATA GCTATTTTAT TAAAAAAGAA AAATACACAA AAAATATTGC TGGAGTGATG ACGAAGGATT CAATGATGAG ATGGTTGGAA AACAGGAAAG AAGTACTATT GGACGACTTG GCTAACTACA ATTTTACAGA TCTGCCGGCC ATCGATCAGT ACAAGCACAT GATCAAGGCT CAACCAAAAC AGAAATTGGA CCTTTCAATT CAGAATGAAT ACCCTGCTCT GCAAACAATT GTCTACCATT CGAAGCAGAT CAACGGTATT TTGGCCGGTT TCTCAGAGCT TACAAGGTTG CTGCTCGAGG CATTTGATTC TAAGAAGTTT CTTTTCTTTA CTAGGAAAAC TCCAGAACAG ATTCAAGAAT TTTTCTCGGA TCTCGACTCG CACGTTCCTA TGGATGTGTT AGAACTGGAT ATTTCTAAGT ATGATAAGTC ACAGAACGAG TTTCATTGTG CTGTAGAGTA TGAAATATGG AAAAGATTGG GTCTCAATGA GTTTTTGGCC GAAGTGTGGA AACAAGGGCA CAGGAAAACA ACTTTGAAGG ATTACATTGC TGGAATCAAG ACATGTCTGT GGTATCAAAG GAAAAGCGGT GATGTGACTA CTTTCATCGG CAATACTGTT ATAATAGCAG CTTGCTTGGG TTCAATGTTA CCGATGGAAA AGGTCATAAA AGGTGCTTTT TGTGGAGACG ATTCCGTTTT GTATTTTCCA AAGGGTTTGG ATTTCCCTGA CATTCAGTCA TGTGCTAATC TCATGTGGAA TTTTGAGGCC AAACTGTATA GAAAGAGGTA CGGTTACTTT TGTGGTAGAT ACATCATACA CCATGATAAG GGAGCAATAG TGTATTATGA TCCTTTGAAG TTGATCTCCA AACTTGGGGC AAAACATATC AAGGATTATG ATCACTTAGA AGAGTTAAGG GTGTCTTTGT GCGATGTTGC TTGTTCGCTC GGAAACTGGT GCTTAGGCTT TCCGCAGCTG AACGCAGCTA TCAAGGAGGT TCATAAAACC GCGATTGATG GTTCGTTTGC TTTTAATTGT GTTAACAAAT TTTTGTGTGA TAAATTTTTA TTTAGAACTT TGTTTTTAAA TGGCTGTTAG

Products

ProductCP
Descriptionmethyltransferase-helicase
MAHIQSIISN ALLESVSGKN TLVNDLARRR MYDTAVEEFN ARDRRPKVNF SKTISEEQTL LVSNAYPEFQ ITFYNTQNAV HSLAGGLRAL ELEYLMLQVP YGSPTYDIGG NFAAHLFKGR DYVHCCMPNL DIRDIMRHEG QKDSIEMYLS RLSRSNKVIP EFQREAFNRY AEAPNEVCCS KTFQDCRIHP PENSGRRYAV ALHSLYDIPV HEFGAALISK NIHVCYAASI LAEALLLDQT EVTLNEIGAT FKREGDDVSF FFADESTLNY SHKYKNILHY VVKSYFPASS RIVYFKEFLV TRVNTWFCKF TKVDTYILYK SVRQVGCDSD QFYEAMEDAF AYKKTLAMFN TERAIFRDTA SVNFWFPKMK DMVIVPLFEG SITSKKMTRS EVIVNRDFVY TVLNHIRTYQ AKALTYQNVL SFVESIRSRV IINGVTARSE WDVDKAILQP LSMTFFLQTK LAALQDDIVM GKFRCLDKTT SELIWDEVGK FFGNVFPTIK ERLVSRKILD VSENALKIKI PDLYVTWKDR FVAEYTKSEE LPHLDIKKDL EEAEQMYDAL SELSILKGAD NFDIAKFKDM CKALDVSPDV AARVIVAVAE NRSGLTLTFD KPTEENVAKA LKSTASEAVV CLEPTSEEVN VNKFSIAEKG RLPVCAESHG LTNANLEHQE LESLNDFHKA CVDSVITKQM ASVVYTGSLK VQQMKNYVDS LAASLSATVS NLCKSLKDEV GYDSDSREKV GVWDVTLKKW LLKPAAKGHS WGVVLDYKGK MFTALLSYEG DRMVTESDWR RVAVSSDTMV YSDIAKLQNL RKTMRDGEPH EPTAKMVLVD GVPGCGKYKG DFERFDLDED LILVPGKQAA AMIRRRANSS GLIRATMDNV RTVDSLLMHP KPRSHKRLFI DEGLMLHTGC VNFLVLISGC DIAYIYGDTQ QIPFINRVQN FPYPKHFEKL QVDEVEMRRT TLRCPGDVNF FLQSKYEGAV TTTSTVQRSV SSEMIGGKGV LNSVSKPLKG KIVTFTQADK FELEEKGYKN VNTVHEIQGE TFEDVSLVRL TATPLTLISK SSPHVLVALT RHTKSFKYYT VVLDPLVQII SDLSSLSSFL LEMYMVEAGS R
ProductCP-ORF2
Descriptionmet transferase/helicase/RNA-dep RNA pol
Modifications3404..3406,aa:OTHER
MAHIQSIISN ALLESVSGKN TLVNDLARRR MYDTAVEEFN ARDRRPKVNF SKTISEEQTL LVSNAYPEFQ ITFYNTQNAV HSLAGGLRAL ELEYLMLQVP YGSPTYDIGG NFAAHLFKGR DYVHCCMPNL DIRDIMRHEG QKDSIEMYLS RLSRSNKVIP EFQREAFNRY AEAPNEVCCS KTFQDCRIHP PENSGRRYAV ALHSLYDIPV HEFGAALISK NIHVCYAASI LAEALLLDQT EVTLNEIGAT FKREGDDVSF FFADESTLNY SHKYKNILHY VVKSYFPASS RIVYFKEFLV TRVNTWFCKF TKVDTYILYK SVRQVGCDSD QFYEAMEDAF AYKKTLAMFN TERAIFRDTA SVNFWFPKMK DMVIVPLFEG SITSKKMTRS EVIVNRDFVY TVLNHIRTYQ AKALTYQNVL SFVESIRSRV IINGVTARSE WDVDKAILQP LSMTFFLQTK LAALQDDIVM GKFRCLDKTT SELIWDEVGK FFGNVFPTIK ERLVSRKILD VSENALKIKI PDLYVTWKDR FVAEYTKSEE LPHLDIKKDL EEAEQMYDAL SELSILKGAD NFDIAKFKDM CKALDVSPDV AARVIVAVAE NRSGLTLTFD KPTEENVAKA LKSTASEAVV CLEPTSEEVN VNKFSIAEKG RLPVCAESHG LTNANLEHQE LESLNDFHKA CVDSVITKQM ASVVYTGSLK VQQMKNYVDS LAASLSATVS NLCKSLKDEV GYDSDSREKV GVWDVTLKKW LLKPAAKGHS WGVVLDYKGK MFTALLSYEG DRMVTESDWR RVAVSSDTMV YSDIAKLQNL RKTMRDGEPH EPTAKMVLVD GVPGCGKYKG DFERFDLDED LILVPGKQAA AMIRRRANSS GLIRATMDNV RTVDSLLMHP KPRSHKRLFI DEGLMLHTGC VNFLVLISGC DIAYIYGDTQ QIPFINRVQN FPYPKHFEKL QVDEVEMRRT TLRCPGDVNF FLQSKYEGAV TTTSTVQRSV SSEMIGGKGV LNSVSKPLKG KIVTFTQADK FELEEKGYKN VNTVHEIQGE TFEDVSLVRL TATPLTLISK SSPHVLVALT RHTKSFKYYT VVLDPLVQII SDLSSLSSFL LEMYMVEAGS RQQLQMDAVF KGHNLFVATP KSGDFPDLQF YYDVCLPGNS TILNKYDAVT MRLRDNSLNV KDCVLDFSKS IPMPKEVKPC LEPVLRTAAE PPRAAGLLEN LVAMIKRNFN APDLTGTIDI ESTASVVVDK FFDSYFIKKE KYTKNIAGVM TKDSMMRWLE NRKEVLLDDL ANYNFTDLPA IDQYKHMIKA QPKQKLDLSI QNEYPALQTI VYHSKQINGI LAGFSELTRL LLEAFDSKKF LFFTRKTPEQ IQEFFSDLDS HVPMDVLELD ISKYDKSQNE FHCAVEYEIW KRLGLNEFLA EVWKQGHRKT TLKDYIAGIK TCLWYQRKSG DVTTFIGNTV IIAACLGSML PMEKVIKGAF CGDDSVLYFP KGLDFPDIQS CANLMWNFEA KLYRKRYGYF CGRYIIHHDK GAIVYYDPLK LISKLGAKHI KDYDHLEELR VSLCDVACSL GNWCLGFPQL NAAIKEVHKT AIDGSFAFNC VNKFLCDKFL FRTLFLNGC

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