Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200306"

Accession numberr200306 [export]
Locus nameRdRp readthrough
Recode1 namepol_r_vir_tnv
Descriptionviral or mobile polyprotein
Recode statusReviewed

Organism

Genomic classViral Genome (Virus)
OrganismTobacco necrosis virus [details]
AcronymTNV

Sequence

GenBank IDsU62546.1
SequenceRNA of 2178 nucleotides [sequence]
OrganisationSequence (1)

Recoding event

Event typeReadthrough (position: 607)
Descriptionproduction of fusion protein and set the ratio between two protein products. TNV-D; Accession no. U62546
ATGGAATCCT TACCAGTCGT TCTTCTTTCC CTAATCTCTA AAACGATTGT GCTACTCTGT AGTTTCTTGA CCCTTATAAT CCAAAATTCC ACCGCTGTTT CTTGGGCATG CATATGCATC TGGCTTTGTT ACGTAGCTTT CCGTTACGTA TTCAAAATCA AAGTTACCAT CCATCCCGCT GCAGTTGAAA CGTTCGAGAC AATGGTTCGC AAATTTCAGG CTGAATCAAT GTTCGCTGAG GAAACCATTC CATGCATGGC AAGTGTAGGT GACAAGGACG CTGATCTCAC CCCCGACCCA CAAAGAGAGG ATATAAAAAT TGTGAAGTCG TCGAGGAGAG TGAGTTACCC CGTCCGTGTA GCACATGTAG CTAAGGCACA GGTGGGCCTC TTACCCAACT CTAGAGCCAA CGAGCTAGTG TACTCTCGTC TCTGCAGGGA GGAGATGGTC AAACATGGGG TTCGACCAAG TCATATTGCC CACATGGTTC CATTGGCGGT GGCGGCATGC TTCATCCCGT TGGATAGCGA CTTTTTAGCC GCTTCCATCA GACAGGGTGA TGGCATGCGG GAGAGGAGGG CCCTTATTGG GGCCTCATGG GAGAAATAGG GAGGCCTATT AGTCACAAGC GGATTCACCA CTCCTACTTG GAGAGGTGAT CCGAGGGGTA TGCTTGTGAC TAAAGGACCT CCCCTCGCAA AACCCCGTAA ATTGTACCGA TTTACTGGGA TGGGAACACA TATTCGGTAC GGAGTGCATG ATCACTCATT GGGCAATGTT CGGCGGGGAC TAGTGGAACG ATTATATATG GTTGAAGTTA AAGGAGAACT TAAACCTACT CCAAAGCCCA CCCCCGGAGC GTTCGGCCAA CTGTCCCGGT TCAACCGCAA ACTTGGTGTT CATCTTCCTA AGACCACCCG ATTGACACCC AAGGAATTCC TTGGGTTTTA TACGGGTCGC AAGTTAGAGA GATACCAAAG AGCAGTTGAG TCGTTAGAGA TGCATCCCGT AAGGGAAAAG GATGCTTGGC TTAGCACGTT CGTGAAGGCT GAAAAACTGA ATATCACAGC CAAACCCGAC CCAGCTCCAC GGGTGATACA ACCGAGGGAT CCTCGGTATA ATGTGGAGGT TGGGCGCTAT TTGCGACATA GTGAGGAAAT GTTGTTCAAG GCCATTAATA AAACATTTGG CGGTAGGACT ATTTTCAAGG GACTCAGCTC TGATCAAGCT GGTGTCGAGA TGAAGGAACT CTGGGATTCA TTCAAGGATC CAGTGGGCAT AGGGATGGAT GCCTCGAGGT TTGACCAGCA CATCTCCAAG GATGCCTTGG AGTTTGAACA TAAGATGTGG CTAAGCATGT TCCCTGTTTC CGAAAGGAAG GAACTTGCCA GGCTGCTTAG CTGGCAAATC AATAATCGAG GCCTTGCCCG ATGTCCAGAT GGGGAGATTA GATACAGAGT TGAGGGATGC AGGATGTCTG GTGACATGAA TACCTCTAGC GGTAACTGCT ACATCATGTG TGCAACTGTG CATAATTGGT GTAGTGAGGT TAAGAAACTC AAGCATTTTC GATTAGCCAA TAATGGTGAT GATTGTATGC TTGTTGTTGA ACGCTGTGAT GAGGAGTCTG TCCGAGAGGG CTTAATTGAG TACTACACCA CACTTGGGTT CACTATGAAG GTGGAGCCTA CAGTGGATGT GTTGGAAAGA GTTGAGTTCT GTCAGACTAG GCCTGTTCTG GTGAATGGAG CTTACCGAAT GGTTCGCAAC CTTCATCAGA GCATGTCGAA AGATCTGCAC TCCCTTCATG ACCTTGGAAG TCGTGTATCC AGAGAGGCCT GGGTAACAGC CGTAGGAACA GGAGGCCGAT GTATGAATGA TGGGGTGCCT GTGTTAAAAG AATTCTTTAA GCAATTCCCA GATTATAACT TGGGGTTAAA GAAGAATTCC GATATGGCAC AGAAATTGAC AGAGGACTGG AGGTACAAGT TTAATCGGAC AAGTGCCTTT CAGGATGTCA CACCCTCCCA GGAAACTCGG TACTCCTTTT GGCTAGCCTT TGGGATACTA CCTGATGAAC AAATTGCCCT GGAGAATGGC TTCAGCCCCT TGAGGGTTGA TATCATAGAT GAGCAGATCC AGGAGGAGGT TTCCCTCCTC CAGTTCTCTG GGGCATGA

Products

ProductCP
MESLPVVLLS LISKTIVLLC SFLTLIIQNS TAVSWACICI WLCYVAFRYV FKIKVTIHPA AVETFETMVR KFQAESMFAE ETIPCMASVG DKDADLTPDP QREDIKIVKS SRRVSYPVRV AHVAKAQVGL LPNSRANELV YSRLCREEMV KHGVRPSHIA HMVPLAVAAC FIPLDSDFLA ASIRQGDGMR ERRALIGASW EK
ProductRdRp
DescriptionRNA-dependent RNA polymerase
Modifications607..609,aa:OTHER
MESLPVVLLS LISKTIVLLC SFLTLIIQNS TAVSWACICI WLCYVAFRYV FKIKVTIHPA AVETFETMVR KFQAESMFAE ETIPCMASVG DKDADLTPDP QREDIKIVKS SRRVSYPVRV AHVAKAQVGL LPNSRANELV YSRLCREEMV KHGVRPSHIA HMVPLAVAAC FIPLDSDFLA ASIRQGDGMR ERRALIGASW EKQGGLLVTS GFTTPTWRGD PRGMLVTKGP PLAKPRKLYR FTGMGTHIRY GVHDHSLGNV RRGLVERLYM VEVKGELKPT PKPTPGAFGQ LSRFNRKLGV HLPKTTRLTP KEFLGFYTGR KLERYQRAVE SLEMHPVREK DAWLSTFVKA EKLNITAKPD PAPRVIQPRD PRYNVEVGRY LRHSEEMLFK AINKTFGGRT IFKGLSSDQA GVEMKELWDS FKDPVGIGMD ASRFDQHISK DALEFEHKMW LSMFPVSERK ELARLLSWQI NNRGLARCPD GEIRYRVEGC RMSGDMNTSS GNCYIMCATV HNWCSEVKKL KHFRLANNGD DCMLVVERCD EESVREGLIE YYTTLGFTMK VEPTVDVLER VEFCQTRPVL VNGAYRMVRN LHQSMSKDLH SLHDLGSRVS REAWVTAVGT GGRCMNDGVP VLKEFFKQFP DYNLGLKKNS DMAQKLTEDW RYKFNRTSAF QDVTPSQETR YSFWLAFGIL PDEQIALENG FSPLRVDIID EQIQEEVSLL QFSGA

Publications