Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200311"

Accession numberr200311 [export]
Locus namegag-pro-pol
Recode1 namepol_r_vir_walleye
Descriptionviral or mobile polyprotein
Recode statusValidated

Organism

Genomic classViral Genome (Virus)
OrganismWalleye dermal sarcoma virus [details]

Sequence

GenBank IDsAF033822.1,L41838.1,U79435.1
Sequencess-RNA of 5259 nucleotides [sequence]

Recoding event

Event typeReadthrough (position: 1,747)
Descriptionproduction of fusion protein and set the ratio between two protein products.
ATGGGTAACT CTTCCTCTAC TCCTCCTCCC TCGGCTCTTA AAAACTCTGA CTTATTTAAG ACTATGCTAA GAACACAATA TTCTGGCTCC GTCAAAACCA GACGCATTAA CCAAGACATA AAGAAACAGT ACCCACTATG GCCAGATCAG GGTACCTGCG CCACCAAACA TTGGGAACAA GCCGTACTAA TCCCATTGGA TTCAGTCTCA GAAGAAACCG CTAAAGTATT GAATTTTCTA CGAGTAAAAA TTCAAGCCCG AAAAGGGGAA ACAGCACGAC AAATGACGGC ACATACTATT AAAAAACTAA TAGTAGGGAC CATTGACAAA AATAAGCAAC AAACAGAAAT ATTACAAAAA ACAGACGAAT CTGACGAAGA GATGGATACC ACAAACACCA TGCTATTCAT AGCAAGAAAC AAAAGAGAAA GAATTGCACA ACAACAACAG GCTGACCTAG CGGCACAGCA GCAAGTCCTC CTTTTACAGC GAGAGCAACA GCGAGAGCAA CGAGAAAAGG ACATTAAAAA ACGCGATGAG AAAAAGAAAA AATTATTGCC GGATACAACA CAAAAGGTGG AACAAACAGA CATCGGTGAA GCCTCTTCCT CTGATGCCTC AGCACAAAAA CCTATCAGTA CTGACAACAA CCCGGACCTA AAAGTTGACG GAGTTCTGAC TCGGTCCCAA CACACAACAG TACCTTCAAA CATAACCATA AAAAAGGATG GTACTTCGGT ACAATATCAA CATCCCATTA GGAATTATCC TACTGGCGAA GGGAACCTTA CTGCACAAGT TCGAAATCCA TTCAGGCCAT TGGAGTTACA ACAGCTTAGG AAAGATTGCC CTGCACTGCC AGAAGGCATT CCCCAGCTAG CAGAATGGTT GACACAGACC ATGGCAATCT ATAATTGCGA CGAGGCAGAC GTTGAACAAT TGGCCAGAGT AATCTTCCCC ACACCTGTTA GACAAATAGC AGGTGTTATA AATGGCCATG CGGCTGCAAA CACAGCCGCT AAAATTCAGA ACTATGTCAC AGCATGTAGG CAGCATTACC CCGCAGTATG TGATTGGGGG ACTATACAAG CCTTTACATA CAAACCTCCC CAAACTGCCC ACGAATATGT TAAACACGCT GAGATAATAT TCAAAAATAA TAGTGGACTT GAGTGGCAAC ATGCGACAGT ACCTTTCATA AACATGGTTG TACAGGGTTT ACCCCCTAAA GTCACCCGTA GTCTGATGTC TGGTAACCCG GATTGGAGTA CCAAAACTAT ACCCCAAATC ATACCCCTCA TGCAGCATTA CCTAAACTTG CAAAGCAGAC AGGATGCAAA AATTAAACAA ACTCCCCTAG TCTTACAGCT TGCGATGCCA GCGCAGACCA TGAACGGGAA TAAAGGATAT GTAGGCTCTT ACCCTACAAA CGAACCATAT TATTCGTTCC AGCAACAACA GCGACCTGCA CCAAGGGCCC CACCTGGAAA TGTACCCAGC AATACCTGCT TCTTTTGCAA ACAACCGGGT CATTGGAAAG CTGACTGCCC CAATAAAACA CGTAATCTTA GAAACATGGG AAATATGGGA CGAGGCGGAA GGATGGGAGG CCCTCCGTAT AGGTCACAAC CATACCCCGC ATTTATACAA CCTCCTCAAA ACCACCAAAA CCAATATAAT GGCCGCATGG ACCGGTCACA GCTACAAGCC TCTGCTCAAG AGTGGCTTCC CGGTACATAT CCTGCATAGG ATCCAATTGA CTGTCCTTAT GAAAAATCTG GTACAAAAAC AACCCAAGAT GTAATTACCA CTAAAAATGC TGAAATTATG GTTACAGTAA ACCACACGAA AATTCCTATG TTGGTAGATA CAGGCGCCTG CCTGACTGCA ATAGGAGGGG CGGCCACAGT GGTTCCCGAC CTCAAATTAA CAAACACAGA AATTATAGCT GTTGGTATTT CCGCTGAACC AGTTCCACAT GTCTTGGCAA AACCTACAAA AATTCAGATT GAGAACACCA ATATAGATAT CTCCCCTTGG TACAACCCTG ATCAAACATT TCATATTCTA GGAAGAGATA CCCTTTCTAA AATGAGAGCC ATAGTATCTT TCGAGAAAAA TGGAGAAATG ACAGTTCTTT TACCACCGAC ATACCACAAA CAATTGTCAT GTCAGACTAA AAACACTCTT AACATAGACG AGTATTTACT ACAATTTCCA GACCAGCTAT GGGCCTCACT ACCAACAGAT ATTGGTCGAA TGTTAGTGCC CCCTATTACA ATAAAAATCA AAGACAATGC ATCATTACCA TCAATTCGCC AATACCCATT ACCTAAAGAT AAAACCGAAG GACTAAGGCC ATTAATTAGT TCACTAGAAA ATCAAGGAAT ATTGATAAAA TGCCATAGCC CATGTAATAC ACCAATCTTT CCTATTAAGA AAGCAGGTCG GGATGAGTAT CGAATGATAC ATGACTTACG CGCAATAAAT AATATAGTTG CCCCCCTTAC TGCAGTTGTG GCAAGTCCTA CCACTGTATT ATCTAACCTC GCTCCGTCAC TACATTGGTT TACGGTGATC GACCTCTCAA ATGCATTCTT TTCAGTACCA ATACACAAGG ACAGTCAATA CCTTTTTGCC TTCACCTTTG AGGGACATCA ATACACATGG ACTGTCTTGC CTCAGGGCTT CATACATAGC CCTACCCTGT TTTCTCAGGC TTTGTACCAG AGTCTCCACA AAATTAAATT CAAAATTTCC TCGGAAATCT GCATTTACAT GGATGACGTT CTCATTGCCT CAAAAGATAG GGACACTAAT TTAAAAGACA CAGCTGTTAT GTTGCAACAT TTGGCTTCAG AAGGACATAA AGTGTCTAAA AAGAAATTAC AGTTGTGTCA GCAGGAAGTT GTTTATCTGG GTCAATTATT GACTCCCGAG GGGCGTAAAA TACTACCAGA CAGAAAAGTA ACGGTCTCAC AGTTTCAACA ACCTACTACG ATCCGACAGA TTCGTGCCTT TCTAGGTCTG GTGGGCTACT GCAGGCATTG GATACCGGAA TTTTCTATAC ATAGTAAATT TTTGGAAAAA CAACTGAAAA AGGACACCGC CGAGCCATTC CAACTGGACG ACCAGCAGGT AGAGGCTTTT AACAAACTTA AACATGCGAT AACAACAGCA CCAGTATTAG TGGTCCCTGA TCCAGCTAAA CCTTTTCAAC TGTATACGTC ACATTCAGAA CATGCATCCA TTGCTGTGTT GACTCAGAAA CATGCAGGAA GAACGCGGCC TATAGCTTTT TTATCGTCCA AATTTGACGC TATAGAGTCG GGGCTTCCTC CATGTTTGAA AGCTTGTGCT TCCATACACA GAAGTCTTAC GCAGGCGGAC TCGTTTATTT TAGGCGCGCC ACTGATTATC TATACTACGC ATGCAATATG TACTCTTTTA CAACGCGATC GATCACAGCT CGTTACCGCT TCCCGCTTCA GCAAATGGGA AGCGGATTTA TTACGACCTG AACTAACCTT TGTTGCCTGC TCAGCAGTCT CTCCGGCGCA CTTATATATG CAGTCTTGTG AAAATAATAT TCCGCCTCAT GACTGCGTTT TACTTACCCA CACGATCTCC AGGCCCCGAC CTGATTTATC TGATCTCCCA ATACCTGACC CTGATATGAC TCTGTTTTCT GATGGCTCTT ATACAACCGG CAGAGGAGGA GCGGCAGTAG TGATGCACAG GCCGGTTACT GATGATTTTA TAATTATCCA TCAGCAACCT GGTGGTGCTT CAGCACAAAC CGCCGAATTG TTAGCCCTAG CCGCAGCATG CCACTTAGCT ACTGATAAAA CTGTTAATAT ATATACAGAC TCCCGTTACG CTTATGGTGT GGTTCATGAC TTTGGGCATC TCTGGATGCA CAGAGGCTTT GTTACGTCCG CTGGAACTCC TATAAAAAAT CACAAGGAAA TAGAGTACCT GTTAAAACAA ATCATGAAAC CCAAACAGGT TTCCGTAATT AAAATAGAGG CCCACACTAA AGGTGTAAGT ATGGAGGTGA GGGGTAACGC CGCTGCTGAT GAGGCCGCTA AAAATGCTGT GTTTTTAGTC CAGAGGGTAC TCAAGAAGGG GGACGCCCTT GCGAGTACGG ACTTGGTCAT GGAATACAGT GAGACGGATG AGAAATTCAC CGCCGGAGCT GAGTTACATG ACGGTGTATT TATGCGAGGG GATCTTATTG TCCCTCCCCT CGAAATGCTT CATGCCATCC TATTGGCCAT ACATGGAGTT TCTCACACGC ACAAAGGGGG AATAATGTCT TATTTTTCGA AATTTTGGAC ACACCCAAAA GCATCTCAAA CCATAGACTT GATACTGGGG CATTGTCAGA TATGTCTCAA ACACAATCCC AAATACAAAT CACGACTACA AGGTCATAGA CCTCTACCAA GCAGACCGTT TGCCCACCTA CAAATAGACT TTGTCCAAAT GTGCGTGAAG AAACCCATGT ATGCCCTGGT TATAATAGAT GTCTTTTCAA AATGGCCAGA AATAATACCA TGTAACAAAG AAGATGCAAA AACTGTATGT GATATATTAA TGAAAGACAT AATCCCAAGA TGGGGGTTAC CTGATCAAAT AGACTCTGAC CAAGGAACGC ACTTCACGGC TAAAATAAGC CAGGAACTGA CCCACTCCAT AGGAGTGGCT TGGAAACTAC ACTGCCCTGG ACACCCACGA TCCAGTGGCA TAGTGGAAAG AACAAATCGA ACTCTAAAAT CCAAAATCAT AAAAGCACAA GAACAGCTGC AATTATCCAA ATGGACAGAA GTGTTGCCAT ATGTCCTATT GGAAATGCGT GCAACCCCAA AGAAACACGG ACTAAGTCCT CATGAGATAG TTATGGGGAG ACCAATGAAA ACCACATATC TAAGTGATAT GTCACCCCTA TGGGCCACTG ACACATTGGT GACGTATATG AATAAACTTA CACGACAATT GTCAGCATAT CATCAACAGG TTGTGGACCA GTGGCCTTCT ACAAGCCTCC CCCCAGGCCC AGAGCCCGGA TCCTGGTGTA TGCTTAGAAA CCCAAAGAAA TCATCTAATT GGGAAGGACC TTTTCTGATC CTCCTCTCTA CACCAACGGC GGTAAAAGTT GAAGGACGAC CAACATGGAT ACACCTGGAT CATTGCAAGT TATTGCGATC ATCTCTCTCC TCCTCGTTGG GGGGGCCAGT CAACCAGCTA CTTTCTTAG

Products

Productenv
MGNSSSTPPP SALKNSDLFK TMLRTQYSGS VKTRRINQDI KKQYPLWPDQ GTCATKHWEQ AVLIPLDSVS EETAKVLNFL RVKIQARKGE TARQMTAHTI KKLIVGTIDK NKQQTEILQK TDESDEEMDT TNTMLFIARN KRERIAQQQQ ADLAAQQQVL LLQREQQREQ REKDIKKRDE KKKKLLPDTT QKVEQTDIGE ASSSDASAQK PISTDNNPDL KVDGVLTRSQ HTTVPSNITI KKDGTSVQYQ HPIRNYPTGE GNLTAQVRNP FRPLELQQLR KDCPALPEGI PQLAEWLTQT MAIYNCDEAD VEQLARVIFP TPVRQIAGVI NGHAAANTAA KIQNYVTACR QHYPAVCDWG TIQAFTYKPP QTAHEYVKHA EIIFKNNSGL EWQHATVPFI NMVVQGLPPK VTRSLMSGNP DWSTKTIPQI IPLMQHYLNL QSRQDAKIKQ TPLVLQLAMP AQTMNGNKGY VGSYPTNEPY YSFQQQQRPA PRAPPGNVPS NTCFFCKQPG HWKADCPNKT RNLRNMGNMG RGGRMGGPPY RSQPYPAFIQ PPQNHQNQYN GRMDRSQLQA SAQEWLPGTY PA
Productenv-pro/pol
Descriptioncapsid polyprotein, protease, RNA polymerase
Modifications1747..1749,aa:OTHER
MGNSSSTPPP SALKNSDLFK TMLRTQYSGS VKTRRINQDI KKQYPLWPDQ GTCATKHWEQ AVLIPLDSVS EETAKVLNFL RVKIQARKGE TARQMTAHTI KKLIVGTIDK NKQQTEILQK TDESDEEMDT TNTMLFIARN KRERIAQQQQ ADLAAQQQVL LLQREQQREQ REKDIKKRDE KKKKLLPDTT QKVEQTDIGE ASSSDASAQK PISTDNNPDL KVDGVLTRSQ HTTVPSNITI KKDGTSVQYQ HPIRNYPTGE GNLTAQVRNP FRPLELQQLR KDCPALPEGI PQLAEWLTQT MAIYNCDEAD VEQLARVIFP TPVRQIAGVI NGHAAANTAA KIQNYVTACR QHYPAVCDWG TIQAFTYKPP QTAHEYVKHA EIIFKNNSGL EWQHATVPFI NMVVQGLPPK VTRSLMSGNP DWSTKTIPQI IPLMQHYLNL QSRQDAKIKQ TPLVLQLAMP AQTMNGNKGY VGSYPTNEPY YSFQQQQRPA PRAPPGNVPS NTCFFCKQPG HWKADCPNKT RNLRNMGNMG RGGRMGGPPY RSQPYPAFIQ PPQNHQNQYN GRMDRSQLQA SAQEWLPGTY PAQDPIDCPY EKSGTKTTQD VITTKNAEIM VTVNHTKIPM LVDTGACLTA IGGAATVVPD LKLTNTEIIA VGISAEPVPH VLAKPTKIQI ENTNIDISPW YNPDQTFHIL GRDTLSKMRA IVSFEKNGEM TVLLPPTYHK QLSCQTKNTL NIDEYLLQFP DQLWASLPTD IGRMLVPPIT IKIKDNASLP SIRQYPLPKD KTEGLRPLIS SLENQGILIK CHSPCNTPIF PIKKAGRDEY RMIHDLRAIN NIVAPLTAVV ASPTTVLSNL APSLHWFTVI DLSNAFFSVP IHKDSQYLFA FTFEGHQYTW TVLPQGFIHS PTLFSQALYQ SLHKIKFKIS SEICIYMDDV LIASKDRDTN LKDTAVMLQH LASEGHKVSK KKLQLCQQEV VYLGQLLTPE GRKILPDRKV TVSQFQQPTT IRQIRAFLGL VGYCRHWIPE FSIHSKFLEK QLKKDTAEPF QLDDQQVEAF NKLKHAITTA PVLVVPDPAK PFQLYTSHSE HASIAVLTQK HAGRTRPIAF LSSKFDAIES GLPPCLKACA SIHRSLTQAD SFILGAPLII YTTHAICTLL QRDRSQLVTA SRFSKWEADL LRPELTFVAC SAVSPAHLYM QSCENNIPPH DCVLLTHTIS RPRPDLSDLP IPDPDMTLFS DGSYTTGRGG AAVVMHRPVT DDFIIIHQQP GGASAQTAEL LALAAACHLA TDKTVNIYTD SRYAYGVVHD FGHLWMHRGF VTSAGTPIKN HKEIEYLLKQ IMKPKQVSVI KIEAHTKGVS MEVRGNAAAD EAAKNAVFLV QRVLKKGDAL ASTDLVMEYS ETDEKFTAGA ELHDGVFMRG DLIVPPLEML HAILLAIHGV SHTHKGGIMS YFSKFWTHPK ASQTIDLILG HCQICLKHNP KYKSRLQGHR PLPSRPFAHL QIDFVQMCVK KPMYALVIID VFSKWPEIIP CNKEDAKTVC DILMKDIIPR WGLPDQIDSD QGTHFTAKIS QELTHSIGVA WKLHCPGHPR SSGIVERTNR TLKSKIIKAQ EQLQLSKWTE VLPYVLLEMR ATPKKHGLSP HEIVMGRPMK TTYLSDMSPL WATDTLVTYM NKLTRQLSAY HQQVVDQWPS TSLPPGPEPG SWCMLRNPKK SSNWEGPFLI LLSTPTAVKV EGRPTWIHLD HCKLLRSSLS SSLGGPVNQL LS

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