Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200313"

Accession numberr200313 [export]
Locus nameprxU
Recode1 nameprxU_s_pro_eaci
Descriptionperoxide reductase
Recode statusProvisional

Organism

Genomic classBacteria (Chromosome)
OrganismEubacterium acidaminophilum [details]

Sequence

GenBank IDsAJ271724.1
SequenceDNA of 612 nucleotides [sequence]

Recoding event

Event typeSelenocysteine (position: 139)
DescriptionSelenocysteine incorporation at UGA codon. Selenocysteine insertion sequence (SECIS) is not yet identified in gram-positive bacteria; in some selenoproteins' mRNA from gram-positive bacteria a stable stem-loop structure is predicted to form in 3'UTR. But there has been no experimental evidence presented of such case
ATGGTATCAG TTGGAAAGAA AGCCCCTGAC TTTGAAATGG CAGGATTCTA TAAAGGCGAG TTTAAGACAT TCAGATTGTC TGAATATCTT GGAAAATGGG TTGTACTTTG CTTCTATCCA GGAGACTTTA CATTTGTCTG AGCCACTGAG GTTTCAGCAG TTGCTGAAAA ATATCCAGAG TTCCAAAAGC TTGGCGTAGA GGTGCTCTCA GTAAGCGTAG ACTCTGTTTT CGTTCACAAG ATGTGGAACG ACAATGAGCT TAGCAAGATG GTTGAAGGCG GCATACCTTT CCCTATGCTT TCAGACGGAG GCGGAAATGT CGGAACTCTT TATGGCGTAT ACGACCCAGA AGCCGGCGTT GAAAACAGAG GACGTTTCCT AATAGATCCG GATGGAATAA TACAAGGTTA CGAGGTGCTT ATCCTCCCAG TTGGACGTAA TGTTTCAGAG ACACTAAGAC AAATACAAGC TTTCCAGCTT GTACGCGAAA CAAAGGGCGC AGAGGTGGCA CCATCAGGCT GGAAGCCAGG AAAGAAAACT CTTAAGCCTG GTCCAGGACT GGTTGGAAAC GTGTACAAGG AGTGGTCTGT AAAGGAAGCC TTTGAAGATT AG

Product

ProductprxU
Descriptionantioxidant protein, thiol-dependent reduction of peroxides
Modifications139..141,aa:Sec
MVSVGKKAPD FEMAGFYKGE FKTFRLSEYL GKWVVLCFYP GDFTFVUATE VSAVAEKYPE FQKLGVEVLS VSVDSVFVHK MWNDNELSKM VEGGIPFPML SDGGGNVGTL YGVYDPEAGV ENRGRFLIDP DGIIQGYEVL ILPVGRNVSE TLRQIQAFQL VRETKGAEVA PSGWKPGKKT LKPGPGLVGN VYKEWSVKEA FED

Publication