Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200323"

Accession numberr200323 [export]
Locus nameselR (selX)
Recode1 nameselR_s_euk_mmus
Descriptionfunction unknown
Recode statusValidated

Organism

Genomic classEukaryota (Chromosome)
OrganismMus musculus [details]

Sequence

GenBank IDsAF195142.1,NM_013759.1
SequencemRNA of 881 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 324)
DescriptionSelenocysteine incorporation at UGA codon. also called selX in humans
CCCGGACCTG GCTGGGAGCT TTTGCCTGTC CCGTCGCGAC CATGTCGTTC TGCAGCTTCT TCGGAGGCGA GGTTTTCCAG AATCACTTCG AGCCAGGTGT CTACGTGTGT GCCAAGTGCA GCTATGAGCT GTTCTCCAGT CACTCGAAGT ACGCACACTC ATCCCCGTGG CCAGCGTTCA CTGAAACCAT CCACCCAGAC AGTGTGACCA AGTGCCCTGA GAAAAACCGA CCAGAAGCTT TAAAGGTGTC CTGTGGCAAG TGTGGCAATG GGTTGGGCCA CGAGTTCCTG AATGATGGCC CCAAGCGGGG ACAATCAAGA TTCTGAATAT TTAGCAGCTC ACTGAAGTTC GTCCCTAAAG GCAAAGAAGC TGCTGCCTCC CAGGGGCACT AGGACATGGA CTGCGAATGG CCTGCCCCCT GCCCCCTGCC CCCTGTCCCC TGCCAACCGC TCCAGCCTCA GTCACCGAAT GATCTGCTCT GGTCAAATCC TTCTATGCCA GCCAGGGTGG TGATGACCCG TGACCTTTTG AGGAGGGGAG TAGGCTGATA CCGGGAACTC TTTGGATCCT TGCCTTCTGG CAGAGAAAAC AAAACTCCGT TTCATAATCT GCAAACTCAT CTTGCCTCAC TCTAGCTTGG GGAAGTGACA GTTGTTGCCC CATTAGCTGG CCAGCGTGGC AGGGACCCTC TTCTCACCAC TTTGTCCAGC GTGTACCTCC CAAGAGAAAG CCACTGTACC TTATTGGTGT GTTTGGAAGC TCTTGACACC TGGGAGAGTG GCTGAAGCTG AGACCCACTC CCCCCCTTGA TTGCTCTCTG GGATGATCAA GTAGAAGTCA ATAAACATGC AGCCTGAGCC GTTAAAAAAA AAAAAAAAAA A

Product

ProductselR
Descriptionselenoprotein R; same as selenoprotein X; possible methionine sulfoxide reductase
Modifications324..326,aa:Sec
MSFCSFFGGE VFQNHFEPGV YVCAKCSYEL FSSHSKYAHS SPWPAFTETI HPDSVTKCPE KNRPEALKVS CGKCGNGLGH EFLNDGPKRG QSRFUIFSSS LKFVPKGKEA AASQGH

Publications