Recode v. 2.0 / Database of translational recoding events.
Details for "r200324"
| Accession number | r200324 [export] |
| Locus name | selT |
| Recode1 name | selT_s_euk_hsap |
| Description | function unknown |
| Recode status | Validated |
Organism
| Genomic class | Eukaryota (Chromosome) |
| Organism | Homo sapiens [details] |
Sequence
| GenBank IDs | AF195141.1 |
| Sequence | mRNA of 1002 nucleotides [sequence] |
| Organisation | SECIS structure (1)
|
Recoding event
| Event type | Selenocysteine (position: 187) |
| Description | Selenocysteine incorporation at UGA codon. |
TGCAGTCTGT CTGAGGGCGG CCGAAGTGGC TGGCTCATTT AAGATGAGGC TTCTGCTGCT TCTCCTAGTG
GCGGCGTCTG CGATGGTCCG GAGCGAGGCC TCGGCCAATC TGGGCGGCGT GCCAGCAAGA GATTAAAGAT
GCAGTACGCC ACGGGGCCGC TGCTCAAGTT CCAGATTTGT GTTTCCTGAG GTTATAGGCG GGTGTTTGAG
GAGTACATGC GGGTTATTAG CCAGCGGTAC CCAGACATCC GCATTGAAGG AGAGAATTAC CTCCCTCAAC
CAATATATAG ACACATAGCA TCTTTCCTGT CAGTCTTCAA ACTAGTATTA ATAGGCTTAA TAATTGTTGG
CAAGGATCCT TTTGCTTTCT TTGGCATGCA AGCTCCTAGC ATCTGGCAGT GGGGCCAAGA AAATAAGGTT
TATGCATGTA TGATGGTTTT CTTCTTGAGC AACATGATTG AGAACCAGTG TATGTCAACA GGTGCATTTG
AGATAACTTT AAATGATGTA CCTGTGTGGT CTAAGCTGGA ATCTGGTCAC CTTCCATCCA TGCAACAACT
TGTTCAAATT CTTGACAATG AAATGAAGCT CAATGTGCAT ATGGATTCAA TCCCACACCA TCGATCATAG
CACCACCTAT CAGCACTGAA AACTCTTTTG CATTAAGGGA TCATTGCAAG AGCAGCGTGA CTGACATTAT
GAAGGCCTGT ACTGAAGACA GCAAGCTGTT AGTACAGACC AGATGCTTTC TTGGCAGGCT CGTTGTACCT
CTTGGAAAAC CTCAATGCAA GATAGTGTTT CAGTGCTGGC ATATTTTGGA ATTCTGCACA TTCATGGAGT
GCAATAATAC TGTATAGCTT TCCCCCACCT CCCACAAAAT CACCCAGTTA ATGTGTGTGT GTGTGTTTTT
TTTAAGGTAA ACATTACTAC TTGTAACTTT TTTTCTTTAG TCATATTTGG AAAAAGTAGA AAATTGGAGT
TACATTTGGA TTTTTTTTCC AA
Product
| Product | selT |
| Description | selenoprotein T; function unknown |
| Modifications | 187..189,aa:Sec |
MQYATGPLLK FQICVSUGYR RVFEEYMRVI SQRYPDIRIE GENYLPQPIY RHIASFLSVF KLVLIGLIIV
GKDPFAFFGM QAPSIWQWGQ ENKVYACMMV FFLSNMIENQ CMSTGAFEIT LNDVPVWSKL ESGHLPSMQQ
LVQILDNEMK LNVHMDSIPH HRS
Publication
- Kryukov GV, Kryukov VM, Gladyshev VN. (1999) New mammalian selenocysteine-containing proteins identified with an algorithm that searches for selenocysteine insertion sequence elements. J Biol Chem. 274(48):33888-33897. [abstract]