Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200338"

Accession numberr200338 [export]
Locus nametrr1 (TR1; TrxR1)
Recode1 nametrr1_s_euk_mmus
Descriptionthioredoxin reductase
Recode statusValidated

Organism

Genomic classEukaryota (Chromosome)
OrganismMus musculus [details]

Sequence

GenBank IDsAB027565.1,NM_015762.1
SequencemRNA of 3328 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 1650)
DescriptionSelenocysteine incorporation at UGA codon.
ACTAGGAACC CGCAGCTCTT TATCCTCAGT TTGCTTCCGT CAGGCCTCGC GTCCACGCGG GAGGTGCGGG ACGCCGACAC CGCGGGGCGA GAAGAGCTGG TGGTTTCACC TTCCTTGTTC ATCCGAACAA AAAAGGCCAA CTTCAAAAGC TGCCAACAAT GAATGGCTCC AAAGATCCCC CTGGGTCCTA TGACTTCGAC CTGATCATCA TTGGAGGAGG CTCAGGAGGA CTGGCAGCAG CTAAGGAGGC AGCCAAATTT GACAAGAAAG TGCTGGTCTT GGATTTTGTC ACACCGACTC CTCTTGGGAC CAGATGGGGT CTCGGAGGAA CGTGTGTGAA TGTGGGTTGC ATACCTAAGA AGCTGATGCA CCAGGCAGCT TTGCTCGGAC AAGCTCTGAA AGACTCGCGC AACTATGGCT GGAAAGTCGA AGACACAGTG AAGCATGACT GGGAGAAAAT GACGGAATCT GTGCAGAGTC ACATCGGCTC GCTGAACTGG GGCTACCGCG TAGCTCTCCG GGAGAAAAAG GTCGTCTATG AGAATGCTTA CGGGAGGTTC ATTGGTCCTC ACAGGATTGT GGCGACAAAT AACAAAGGTA AAGAAAAAAT CTATTCAGCA GAGCGGTTCC TCATCGCCAC AGGTGAGAGG CCCCGCTACC TGGGCATCCC TGGAGACAAA GAGTACTGCA TCAGCAGTGA TGATCTTTTC TCCTTGCCTT ACTGCCCGGG GAAGACCCTA GTAGTTGGTG CATCCTATGT CGCCTTGGAA TGTGCAGGAT TTCTGGCTGG TATCGGCTTA GACGTCACTG TAATGGTGCG GTCCATTCTC CTTAGAGGAT TTGACCAAGA CATGGCCAAC AAAATCGGTG AACACATGGA AGAACATGGT ATCAAGTTTA TAAGGCAGTT CGTCCCAACG AAAATTGAAC AGATCGAAGC AGGAACACCA GGCCGACTCA GGGTGACTGC TCAATCCACA AACAGCGAGG AGACCATAGA GGGCGAATTT AACACAGTGT TGCTGGCGGT AGGAAGAGAT TCTTGTACGA GAACTATTGG CTTAGAGACC GTGGGCGTGA AGATAAACGA AAAAACCGGA AAGATACCCG TCACGGATGA AGAGCAGACC AATGTGCCTT ACATCTACGC CATCGGTGAC ATCCTGGAGG GGAAGCTAGA GCTGACTCCC GTAGCCATCC AGGCGGGGAG ATTGCTGGCT CAGAGGCTGT ATGGAGGCTC CAATGTCAAA TGTGACTATG ACAATGTCCC AACGACTGTA TTTACTCCTT TGGAATATGG CTGTTGTGGC CTCTCTGAAG AAAAAGCCGT AGAGAAATTT GGGGAAGAAA ATATTGAAGT TTACCATAGT TTCTTTTGGC CATTGGAATG GACAGTCCCA TCCCGGGATA ACAACAAATG TTATGCAAAA ATAATCTGCA ACCTTAAAGA CGATGAACGT GTCGTGGGCT TCCACGTGCT GGGTCCAAAC GCTGGAGAGG TGACGCAGGG CTTTGCGGCT GCGCTCAAGT GTGGGCTGAC TAAGCAGCAG CTGGACAGCA CCATCGGCAT CCACCCGGTC TGTGCAGAGA TATTCACAAC GTTGTCAGTG ACGAAGCGCT CTGGGGGAGA CATCCTCCAG TCTGGCTGCT GAGGTTAAGC CCCAGTGTGG ATGCTGTTGC CAAGACTACA GACCATTGCC TTGCTTCCTT GCCCACGCCC AGGTGAAGTT CAGGAAGGCT CTTGGGTCCT AGGCGCCAAT TCAAGGTGCT GTCCTAAGGC CACCGGGTCC CTGGGATCTT GTGGGTAGGA GGTGGCAGGT CGAAGGAGGC TGCAGCATCG CACTGGGGTC ACCATGACAG ACTCAGACTG ACATCTGGCA GAGCATCACA GGCATGCGTC CATGAAGTCA CTGGCCTCAA GCCCAAGTGG TGGGCAGTGA CAGAAGAGCT GCCGGGTCTG TTGAGCTCAA CCTTTTCCTG TAGATTGTCT TAGTCTCACT TTCAAGCTGT CTAATGTCAA TTCTGTTTTT TCTTTTTTCC TCCATGGGGT TAATGATACT AGAGATAGGG AATATTAGCA ATCAGTTTTT GTCATGGCTG GTCCATCTGC AACAGTCTTT ACTGTGTGGA AGTGGGTGAG ATGGCTTATG AGAGCCAAAC CAATTTATCC CCAGAAAGAC GAATTACCCT GTGACTAAAA TACACTGTCT GCTTTTACTA ACTGGTGTAG CATTGTCTCC TTTAATAAGT CTTGTGTCCA AAACGAGAAA AACCATTGGC CACTTTTGCA AGTTTCCTGC AGTGTGCTTA GCAAGGGAGG TGGCGACTTG GCTAATCTAC TTGAACTGCA TCGCATGGCT CTTGGGTAGC TTAGAGCATC GCAGGGTAGA GGCAGACCAG CAGTGAGTGT CTCTCCTGGT ACAATTATTG TCTGGTTCTC AGTGGAAAAC GCTTAATTTG CTTTAAACTT GGTGTTTTTG TGAGGTGGAT TTAGTCTTAA GCTGTGTCCC ATAAGAACTA CATTCACAGG CAAGTGGCTC TTCCTCCACA CAGCCTATAC ATCTTCTGAG GTAATTACTT TCATAAGGAA GCTGTTCATA ACGTAAGTTA TTATTATTAT TGAACACAGG TGGATGTGAA GGATTTTTCA TTGAAAAACC AAATGGTTTT TCTTTTTTTC TGTTCAGTGA GCCCACAGGA ACTCTGTCAG GACAGCCAGT ACTCTGCCGG CATGGCTGCT GGGGCGTTTA CGGTGTAGTT TAGCTCCTAG GTTACATGAC CGTGAACATG CTGGCTGAGG ACTACACAAA CCAGGTTTCC CACCATACAC GGCCTGGCCC TGCAGCTTCT TTTCTTGCCC TCCCCTTTGC CTGTCCCCAC CTGCAGTACT GAGTGGCGTT TCACAGTACC CTTCTGGGCC ACCTCAGGGA AGGGATTTGC CTGGTGTCCA GCCAGCAGCA CCCACCCTGC CCCACGAGGC TCCCTCACAC CTGCCCCCCC GTCCTTGTGT TGAAGACAGT GGGAAGAGGA GAAAGGACCA GGGAAACCAA GGGAGTTGAC TGTTCAGTTT TATTTATTTA TTTTTTAAGT TTTTTTTTCC TTTCAAGTCT GCCAGTCTCT GAGATCAGAA CAACAGACAG TGTAGGGTAA CTAATCATGT GATTCTCTTA GTGGAATGAA ATGTTCTACC CCCACAAGAA GGAGTATACG TCATTGTTCA TATTCTGTAA TCGCACAATG TATTGTAATG CAAATTCCAA TTCCATGTAT TTTTATTACA ATTTTTCTGG AAAAAAATGT GAACCAATAA AAGATGTTGA TGCACAAA

Product

Producttrr1
Descriptionthioredoxin reductase 1 (cytosolic); NADPH-dependent reduction of thioredoxin
Modifications1650..1652,aa:Sec
MNGSKDPPGS YDFDLIIIGG GSGGLAAAKE AAKFDKKVLV LDFVTPTPLG TRWGLGGTCV NVGCIPKKLM HQAALLGQAL KDSRNYGWKV EDTVKHDWEK MTESVQSHIG SLNWGYRVAL REKKVVYENA YGRFIGPHRI VATNNKGKEK IYSAERFLIA TGERPRYLGI PGDKEYCISS DDLFSLPYCP GKTLVVGASY VALECAGFLA GIGLDVTVMV RSILLRGFDQ DMANKIGEHM EEHGIKFIRQ FVPTKIEQIE AGTPGRLRVT AQSTNSEETI EGEFNTVLLA VGRDSCTRTI GLETVGVKIN EKTGKIPVTD EEQTNVPYIY AIGDILEGKL ELTPVAIQAG RLLAQRLYGG SNVKCDYDNV PTTVFTPLEY GCCGLSEEKA VEKFGEENIE VYHSFFWPLE WTVPSRDNNK CYAKIICNLK DDERVVGFHV LGPNAGEVTQ GFAAALKCGL TKQQLDSTIG IHPVCAEIFT TLSVTKRSGG DILQSGCUG

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