Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200342"

Accession numberr200342 [export]
Locus nametrr2 (TR2; TrxR2)
Recode1 nametrr2_s_euk_mmus
Descriptionthioredoxin reductase
Recode statusValidated

Organism

Genomic classEukaryota (Chromosome)
OrganismMus musculus [details]

Sequence

GenBank IDsAB027566.1,XM_147226.1,BC052758.1
SequencemRNA of 1902 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 1604)
DescriptionSelenocysteine incorporation at UGA codon. Sun,Q.A. et al call this gene tr3
AGCCCTGACC GCCTGAGGTC CCCGGACCAT GGCGGCGATG GTGGCGGCGA TGGTGGCGGC GCTGCGTGGA CCCAGCAGGC GCTTCCGGCC GCGGACACGG GCTCTGACAC GCGGGACAAG GGGCGCGGCG AGTGCAGCGG GAGGGCAGCA GAGCTTTGAT CTCTTGGTGA TCGGTGGGGG ATCCGGTGGC CTAGCTTGTG CCAAGGAAGC TGCTCAGCTG GGAAAGAAGG TGGCTGTGGC TGACTATGTG GAACCTTCTC CCCGAGGCAC CAAGTGGGGC CTTGGTGGCA CCTGTGTCAA CGTGGGTTGC ATACCCAAGA AGCTGATGCA TCAGGCTGCA CTGCTGGGGG GCATGATCAG AGATGCTCAC CACTATGGCT GGGAGGTGGC CCAGCCTGTC CAACACAACT GGAAGACAAT GGCAGAAGCC GTGCAAAACC ATGTGAAATC CTTGAACTGG GGTCATCGCG TCCAACTGCA GGACAGGAAA GTCAAGTACT TTAACATCAA AGCCAGCTTT GTGGATGAGC ACACAGTTCG CGGTGTGGAC AAAGGCGGGA AGGCGACTCT GCTTTCAGCT GAGCACATTG TCATTGCTAC AGGAGGACGG CCAAGGTACC CCACACAAGT CAAAGGAGCC CTGGAATATG GAATCACAAG TGACGACATC TTCTGGCTGA AGGAGTCCCC TGGGAAAACG TTGGTGGTTG GAGCCAGCTA TGTGGCCCTA GAGTGTGCTG GCTTCCTCAC TGGAATTGGA CTGGATACCA CTGTCATGAT GCGCAGCATC CCTCTCCGAG GCTTTGACCA GCAAATGTCA TCTTTGGTCA CAGAGCACAT GGAGTCTCAT GGCACCCAGT TCCTGAAAGG CTGTGTCCCC TCCCACATCA AAAAACTCCC AACTAACCAG CTGCAGGTCA CTTGGGAGGA TCATGCTTCT GGCAAGGAAG ACACAGGCAC CTTTGACACT GTCCTGTGGG CCATAGGGCG AGTTCCAGAA ACCAGGACTT TGAATCTGGA GAAGGCTGGC ATCAGTACCA ACCCTAAGAA TCAGAAGATT ATTGTGGATG CCCAGGAGGC TACCTCTGTT CCCCACATCT ATGCCATTGG AGATGTTGCT GAGGGGCGGC CTGAGCTGAC GCCCACAGCT ATCAAGGCAG GAAAGCTTCT GGCTCAGCGG CTCTTTGGGA AATCCTCAAC CTTAATGGAT TACAGCAATG TTCCCACAAC TGTCTTTACA CCACTGGAGT ATGGCTGTGT GGGGCTGTCT GAGGAGGAGG CTGTGGCTCT CCATGGCCAG GAGCATGTAG AGGTTTACCA TGCATATTAT AAGCCCCTAG AGTTCACGGT GGCGGATAGG GATGCATCAC AGTGCTACAT AAAGATGGTA TGCATGAGGG AGCCCCCACA ACTGGTGCTG GGCCTGCACT TCCTTGGCCC CAACGCTGGA GAAGTCACCC AAGGATTTGC TCTTGGGATC AAGTGTGGGG CTTCATATGC ACAGGTGATG CAGACAGTAG GGATCCATCC CACCTGCTCT GAGGAGGTGG TCAAGCTGCA CATCTCCAAG CGCTCCGGCC TGGAGCCTAC TGTGACTGGT TGCTGAGGCT AAGTCACCAT CCCTGCTGAG CTAAGGACAC ACAGTGTGCC ATGTGCCCAA TAGAAGGCTC CTCAGACACC TGGATCCAGG ACTGGAAGGC CTTGCTGCCT CTCAGAGATC TGAGAAGATG TGGATGGAAC ATCGTGTGTC CTGCAGGGAT GACTATACCC CTACATTCTC TGGCCAGCCT CTGACACTCC CAGCGTCAGA TGATGATGGC CTGGGCAGAA ACCCCATGTG GGCCGCCCAG GTTTGAACCC CTGGCATTTC TAGAGCACTA ATAAAGAGGA TGTTTTACTA AA

Product

Producttrr2
Descriptionthioredoxin reductase 2 (mitochondrial); NADPH-dependent reduction of thioredoxin
Modifications1604..1606,aa:Sec
MAAMVAAMVA ALRGPSRRFR PRTRALTRGT RGAASAAGGQ QSFDLLVIGG GSGGLACAKE AAQLGKKVAV ADYVEPSPRG TKWGLGGTCV NVGCIPKKLM HQAALLGGMI RDAHHYGWEV AQPVQHNWKT MAEAVQNHVK SLNWGHRVQL QDRKVKYFNI KASFVDEHTV RGVDKGGKAT LLSAEHIVIA TGGRPRYPTQ VKGALEYGIT SDDIFWLKES PGKTLVVGAS YVALECAGFL TGIGLDTTVM MRSIPLRGFD QQMSSLVTEH MESHGTQFLK GCVPSHIKKL PTNQLQVTWE DHASGKEDTG TFDTVLWAIG RVPETRTLNL EKAGISTNPK NQKIIVDAQE ATSVPHIYAI GDVAEGRPEL TPTAIKAGKL LAQRLFGKSS TLMDYSNVPT TVFTPLEYGC VGLSEEEAVA LHGQEHVEVY HAYYKPLEFT VADRDASQCY IKMVCMREPP QLVLGLHFLG PNAGEVTQGF ALGIKCGASY AQVMQTVGIH PTCSEEVVKL HISKRSGLEP TVTGCUG

Publications