Recode v. 2.0 / Database of translational recoding events.
Details for "r200346"
| Accession number | r200346 [export] |
| Locus name | tsh |
| Recode1 name | tsh_p_bac_psa |
| Description | tail component |
| Recode status | Validated |
Organism
| Genomic class | Viral Genome (Phage) |
| Organism | Listeria phage 2389 [details] |
Sequence
| Variant | Listeria phage PSA |
| GenBank IDs | AJ312241.1 |
| Sequence | mRNA of 652 nucleotides [sequence] |
Recoding event
| Event type | +1 Frameshifting (position: 577) |
| Description | production of fusion protein. |
ATGGCAACAA TTGTTGAAGA TTTTGATGCA ACAAGAGTAA CAAATGTAGG TACGAAATTC ACTGGTGATA
CTGCAAGTAT TGCATTTGGG TGTCTAGGTT CTATTGAAGG TGAAACAGAG TTACTCGAAT TAGTAAAAAA
ATGTGAAGGT GTTGAAACGA AGAAAAAAAC AACGCCCCAA AAAATGACAC TGACGTTGAC AGGTCATGTA
AAAGTAGACG TGTTACGAGA TATTTTTGGT TTATCAAATG AAGGTTTGAA GGTAGGAGTT TACTCGTATG
GTGCTGACAG TTTAAGTAAA CCATTTATTT TAACAGCGGA TGTGTTAGAT GAATTTGAAG CGCAAACAAA
ATTAATTGCA TTCTCAAATT GTGTGGCGGC AACAGGATTA AAAGTAACAG TAGAAAATGG TGCAGATGAA
GTAGCTGAAA TTGAATTAGA ATTCACTGCT ATGATTGATG ATAATAGAAA ATGTTATTAT GAAGCAATTG
TATCAGAGCT TGATGCTACT GGTCGCGATG CATTTGTAAA GCAATGGCAC ACAAATTTCA CACCAGAAAT
GGTTGTTGCC ACACCCTGAA ACTCCCCTTG AATTGCCTTT GGAAAATGAA TCTGGCATAG GGGACGACTC
AGAAGAAACA ACTCAAGATT AG
Products
| Product | tsh |
| Description | tail component |
MATIVEDFDA TRVTNVGTKF TGDTASIAFG CLGSIEGETE LLELVKKCEG VETKKKTTPQ KMTLTLTGHV
KVDVLRDIFG LSNEGLKVGV YSYGADSLSK PFILTADVLD EFEAQTKLIA FSNCVAATGL KVTVENGADE
VAEIELEFTA MIDDNRKCYY EAIVSELDAT GRDAFVKQWH TNFTPEMVVA TP
| Product | tsh-orf2 |
| Description | tail component |
| Modifications | 576..578:ribosomal_frameshift |
MATIVEDFDA TRVTNVGTKF TGDTASIAFG CLGSIEGETE LLELVKKCEG VETKKKTTPQ KMTLTLTGHV
KVDVLRDIFG LSNEGLKVGV YSYGADSLSK PFILTADVLD EFEAQTKLIA FSNCVAATGL KVTVENGADE
VAEIELEFTA MIDDNRKCYY EAIVSELDAT GRDAFVKQWH TNFTPEMVVA TPETPLELPL ENESGIGDDS
EETTQD
Publication
- Zimmer M, Sattelberger E, Inman RB, Calendar R, Loessner MJ. (2003) Genome and proteome of Listeria monocytogenes phage PSA: an unusual case for programmed + 1 translational frameshifting in structural protein synthesis. Mol Microbiol. 50(1):303-317. [abstract]