Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200347"

Accession numberr200347 [export]
Locus namevhuD
Recode1 namevhuD_s_arc_mjan
Descriptionhydrogenase
Recode statusValidated

Organism

Genomic classArchaea (Chromosome)
OrganismMethanocaldococcus jannaschii [details]

Sequence

GenBank IDsU67560.1
SequenceDNA of 499 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 133)
DescriptionSelenocysteine incorporation at UGA codon.
TTGGCAGGGA CAAGTAGAAT GCAATACCCT GCAACCGTAA GAATCGTAAG GCTCCCTTGT ACCGGTAAAT TCGATATTAC CTACGCTTTA AGGGCTTTCC AAAAGGGAGC CGATGCGGTT ATGGTTGTAG GGTGAAAGAA AGGAGAGTGT GCCTACGAAA CAGGTAACTT AAAGGCTGAG GAGAGGGTTA GGTTCGCTAA ACAATTATTA GATGAATTAG GAATTGGCGG AGACAGAATT GACATGTTTT TCATGTCTGC CGCTGAGGCA GATAAATTCG TCTCCGCCGT TAATGAAATG ACTGCAAGAG TTGAAAAACT CGGACCTAAC CCTCTCAAAG CTCAGTAAAG CCGGAGATTA AAGGGATGAG TTCTCTCGGG AACCCGTCAA GGGACCGAGA GAACAACCGC CCCATAAGTA AGGGGTTCTC CGGCATTGCA AAACTAATTT AAACTTTTTA GGGTGATTAC CTTGGCAGTT AAGGTAGGGA TGATACAAC

Product

ProductvhuD
DescriptionF420 non-reducing hydrogenase subunit
Modifications133..135,aa:Sec
LAGTSRMQYP ATVRIVRLPC TGKFDITYAL RAFQKGADAV MVVGUKKGEC AYETGNLKAE ERVRFAKQLL DELGIGGDRI DMFFMSAAEA DKFVSAVNEM TARVEKLGPN PLKAQ

Publications