Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200348"

Accession numberr200348 [export]
Locus namevhuU
Recode1 namevhuU_s_arc_mjan
Descriptionhydrogenase
Recode statusValidated

Organism

Genomic classArchaea (Chromosome)
OrganismMethanocaldococcus jannaschii [details]

Sequence

GenBank IDsU67560.1
SequenceDNA of 299 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 58)
DescriptionSelenocysteine incorporation at UGA codon. translation start site is unknown.
AAAGTTGATG AAGTAAAATT AAACTTAATA GAAATGGTAT TAAGAGCTTA CGACCCTTGA TACTCATGTG CCGCCCACAT AATAGTTAAA GATGAAAAAG GAAACAAAAT TATTGAGGTT ATTAAAGAAT AAGCTCACAA CCGAACCCAT TTGGGAGGTT GTGAGCTCTC TCCCTCTATG CAGGGGGAAT TCGCTAAAAT CCTTTTTTGG GATTTTAGCG TATAATTTTT AGGAGGATGA GATTAATGAG CATAACAATT CAAAAAGATG CTTGTTTAGT CTGTTATGCG TGTCAGGCG

Product

ProductvhuU
DescriptionF420 non-reducing hydrogenase subunit
Modifications58..60,aa:Sec
KVDEVKLNLI EMVLRAYDPU YSCAAHIIVK DEKGNKIIEV IKE

Publications