Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200352"

Accession numberr200352 [export]
Locus nameOAZ1
Recode1 nameoaz1_p_euk_mmus
DescriptionOrnithine decarboxylase antizyme OAZ1
Recode statusValidated

Organism

Genomic classEukaryota (Chromosome)
OrganismMus musculus [details]

Sequence

GenBank IDsBQ944709.1,BQ571146.1,CX237440.1,BG869871.1,CF981772.1,BG518982.1,CF893041.1,CB203771.1,BI649327.1,AA276495.1,CX768692.1,CK789317.1,BF584908.1,CX241264.1,BG094492.1,DT914153.1,BF011459.1,BF233521.1,BI151097.1,BQ565046.1,CB183459.2,CD742400.1,BI250551.1,BU512116.1,CD740877.1,BU511235.1,BQ941947.1,CB204204.1,AA921118.1,CK129790.1,CB195029.1,CX237455.1,BU518780.1,CX567809.1,CV560638.1,BI410552.1,BI409672.1,CK795908.1,BG968988.1,BI145111.1,BG095144.1,BG094324.1,BI554520.1,BG866282.1,NM_008753.3,CA321921.1,BU512740.1,BQ960329.1,CX729581.1,CA978867.1,CF551011.1,CA978245.1,BU511504.1,BF384374.1,BU515365.1,BC060035.1,BQ178250.1,CA980445.1,DW711486.1,CA983988.1,BU558629.1,BG518737.1,BF781543.1,CB589654.1,CB182490.1,BI104271.1,BC046290.1,BI904077.1,CA322054.1,CB205359.1,BI737195.1,CK789566.1,BI217642.1,BQ963901.1,CF584012.1,CK129045.1,CK032489.1,BQ963309.1,AW146113.1,CK031878.1,CK791144.1,CX565557.1,CB845263.2,CK791858.1,BU841133.1,CK780497.1,BU512802.1,BU510135.1,BU514683.1,DV654500.1,CK129101.1,BU520122.1,BI905186.1,CA978901.1,BQ951590.1,CX237369.1,CB947407.1,BG808690.1,CB204839.1,BI332002.1,BM945155.1,CB204945.1,BU515201.1,BQ445548.1,BQ927994.1,BF237318.1,CA979593.1,BQ943206.1,CK128322.1,BU520342.1
SequencemRNA of 953 nucleotides [sequence]
OrganisationPseudoknot (1) [see structure]
Sequence (1)

Recoding event

Event type+1 Frameshifting (position: 211)
DescriptionEfficiency of ODC antizyme biosynthesis is modulated by polyamine levels; sensor for an autoregulatory circuit
GGCCGGATGG TGAAATCCTC CCTGCAGCGG ATCCTCAACA GCCACTGCTT CGCCAGAGAG AAGGAAGGGG ACAAACGCAG CGCCACGCTT CACGCCAGCC GCACCATGCC GCTTCTTAGT CAGCACAGCC GCGGCGGCTG CAGCAGCGAG AGTTCTAGGG TTGCCCTTAA TTGCTGTAGT AACCTGGGTC CGGGGCCTCG GTGGTGCTCC TGATGTCCCT CACCCACCCC TGAAGATCCC AGGTGGGCGA GGGAACAGTC AGCGGGATCA CAGTCTTTCA GCTAGCATCC TGTACTCCGA CGAGCGGCTG AATGTGACAG AGGAGCCGAC GTCTAACGAC AAGACCAGGG TCCTGAGCAT CCAGTCCACG CTCACGGAGG CCAAGCAGGT CACCTGGAGG GCGGTGTGGA GTGGTGGTGG CCTCTACATC GAGCTCCCAG CTGGACCTCT GCCTGAGGGC AGTAAGGACA GTTTTGCAGC TCTCCTAGAG TTCGCAGAGG AGCAACTCCA GGCTGACCAC GTTTTCATCT GCTTCCCCAA GAACCGTGAG GACAGAGCCG CCCTACTCCG AACCTTCAGC TTTCTTGGCT TTGAGATTGT GAGACCCGGG CATCCCCTTG TCCCCAAGAG ACCCGACGCT TGCTTCATGG TCTACACTCT GGAGAGAGAG GACCCGGGTG AGGAGGACTA GGTGCCAGCC CTGCCCAGTG TCCCTGTGCC CTCTCCTGGG TTAGTCCACA TGTCGTGATT GTGCAGAATA AACGCTCACT CCATTAGCGG GGTGCTTCTT CGAGCTGAAT GCTGTGTTTG TCACACTCAA GTGTTGGCTT TAATTCTAAA TAAAGGTTTC TATTTTACTT TTTTATTGCT GTTTAAGATG GTCAGGTGAC CTATGCTATA GCAGTCTCCT TTGAAGTCTG GAAAAATAGT GTCACCTCCC CTGGCTCAAA TCC

Products

Productoaz1-ORF1
MVKSSLQRIL NSHCFAREKE GDKRSATLHA SRTMPLLSQH SRGGCSSESS RVALNCCSNL GPGPRWCS
Productoaz1
DescriptionODC antizyme:1. Inhibition and targeting ODC for degradation; 2.Regulation of polyamine transport
Modifications210..212:ribosomal_frameshift
MVKSSLQRIL NSHCFAREKE GDKRSATLHA SRTMPLLSQH SRGGCSSESS RVALNCCSNL GPGPRWCSDV PHPPLKIPGG RGNSQRDHSL SASILYSDER LNVTEEPTSN DKTRVLSIQS TLTEAKQVTW RAVWSGGGLY IELPAGPLPE GSKDSFAALL EFAEEQLQAD HVFICFPKNR EDRAALLRTF SFLGFEIVRP GHPLVPKRPD ACFMVYTLER EDPGEE

Publications