Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200358"

Accession numberr200358 [export]
Locus nameAZL
Recode1 nameoazl_p_euk_drer
DescriptionOrnithine decarboxylase antizyme AZL
Recode statusValidated

Organism

Genomic classEukaryota (Chromosome)
OrganismDanio rerio [details]

Sequence

GenBank IDsEB767245.1,CN506787.1,DV596374.1,DV598796.1,DV599420.1,EE310553.1,CK240254.1,CN023836.1,CK237532.1,DV584800.1,DT870904.1,EB858809.1,DT067859.1,CT669368.2,DT076051.1,DT865233.1,CN176016.1,AB017118.1,CK360006.1,CN317003.1,CF266353.1,CN015837.1,CT618760.2,CN505441.1,CO813413.1,CV484779.1,DV595804.1,CO809593.1,EH998163.1,DN896921.1,CT607370.2,DN835915.1,CT656331.2,CN831938.1,CK400229.1,EG580421.1,DT077041.1,NM_194432.1,CT727540.2,CN833984.1,CN831868.1,CT718849.2,CK362380.1,DT056777.1,CF550492.1,EE315666.1,CK148000.1,CT697974.2,CF243232.1,CN838682.1,CF549717.1,DV597125.1,CN511256.1,DV593699.1,CK362754.1,DY546759.1,CK356952.1,CF550380.1,CO921446.1,BM778375.1,CN504567.1,CN019605.1,EE312976.1,CV491743.1,CN018920.1,CK240100.1,CK397884.1,CO929166.1,CN016042.1,CN842538.1
SequencemRNA of 2038 nucleotides [sequence]
OrganisationPseudoknot (1) [see structure]

Recoding event

Event type+1 Frameshifting (position: 225)
DescriptionEfficiency of ODC antizyme biosynthesis is modulated by polyamine levels; sensor for an autoregulatory circuit. long isoform
CAGCAGCCGA GCGCACAGGC CGCCGTGAAA CCTCCCGAGG CCGGATGGTA AAATCCAACC TCCAGCGCAT CCTAAACAGT CATTGCTTTG CCCGCGAAAA AGAAGGAAAG AAACAGTGCG AGAGCAGCAT CATGGAGGCG CTCAGTTCCA GTATTACCGA CAGGATGGCG AGTCCGACTG TATGTTGTAG TAGTACCACT GGTCCAGGGC CTCTGTGGTG CTCCTGATGC CCCTCACCCA CCTCTGAAGA TCCCAGGTGG GCGAGGGAAC GGAGCACGGG ATCACCCATC CACAACACAG ACGCTGTACT CCGACAGGAA GTTGACTGTG ACAGAAGAGC CTGCTGGTCC CGGTCGTCCG CAGATCCTGC ATTTCCAGAG TCGTCCCGCA GCGGCGCGGC TTATCCAGTG GGAGGCAGTG CTGAGAGGAG ATGGCCTGTT TGTGGAGATT CCCTGCGAAC CCTTTCCAGA CGGCAGCAAG GAGAGCTTCA TCTCTCTGCT GGAGTTTGCT GAAGAGCATC TGAAGGTGGT CAGTGTGTTT GTCTGCTTCT ACAAGAACAG GGAGGATCGT GTAAAACTGG TGCGGACGTT CAGCTTTCTG GGCTTTGAGA TGGTGAAACC GGGTCATGCT CTGGTCCCTG CTCGACCTGA CGTCCTCTTC ATGGCCTACA ACTTTGACAG GGATTCCTCG GATGAAGATT AGTTTCCACA AGACGCTTGT TTGCATCATA ATCATCGTTA TTATTGATTA TTATTATTAT AGATCTCGCT GACAGACTCC CTCTGTAGAC GGAGACTGTG AGCGAGTATA AGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTTGTTGAA ATGTTCACAC ACAGGTCATT GCTCTGCATT GTTTGGGTAC GGAAGCTCCT CAGTTGATGA TTGTTGTTGT TATTATGGTC TGTTTCTTCA TCGATTATGG TCAGTTTGTG TTTAGTTTTA CCTCAGAATC TGCTTTCTAG TTTTATTGAG CGTCACTGTT GGAGTTAATC AGAGGAACAC CACATTGATT TGATTGGTCC GTTGATTGAT TGATTTGTTC GGTCAGTTGA TTGGACACTT AATTGATTGG TCAGTCGATT GATTGATTTA TTTTACAGAT TCATTGATTG ATTGGTCGGT CAGTCAATTG ACTTAAGTTG ATTGAATGAT CGATCCATCA ATTGATTGCT TGATTTGATA TTGGTCTGTC GATTGACTGA TTTGGTTTTT CTATTGATCA AGATTGATTT GGTCAGTCGA ATGATTGAAT GTTCGGTCTT GACTATTTGA TTAATTGGTC AGTTGATTGA TTGATTGATT GATTGACTGA TCGGTCAGTC AGTTGGTAAA TTGACTGGTT GATTGATTGA TTGATTGACT GGTCAGTTTA TTGACTGGTC TCAGTCGATT GATTGGTTGA TAGATTGGTC AGTCGATTGA TTGACTGGTT GTTCAGTCGA TTGGTTGATC GATCGGTCAG TGATTGATTG ATTAATTGAC TGGTCAGTCA ATTGTTTGAT TGATTGGTTG GTCAGTCTAT TGGTTGATTG ACTGGTCCGT CAATTGATTG ATTGGTTGAT CAATTGGTTA GTCGATTGAT TGATTGACTG GTCGGTTGAT TGATTGATTG ATTGACTGGT CGGTCGATTG ACTAGTCTGT CAGTCTATTG GTTGATTGAT TTGGTCTGTC GATCGATTGG TCAGTCGATT GATTGGTCGG TGAGTCAATT GATTGATTGG TCAGTCCATA GATTGATTTG ATTGGTCGGT TGATTGATTT TGGTCGGTCG ATTGATTCTC AGATTGTGAT TTCCTGGTAC ACACCCCTGA AGGGAAGCTA AATGAACACA CCCAAAGCTC TTCTGCGTCT CTCTGTGCTG TTATTTTGTA TATCAGAATG GATTCAGACT TCTGTTGTGT TTGTGCTGTT ACTGCGTTCA CTCCCTCTCC ATCTTTTATT TTGGACACAT TTATCCTCTA TAGTGGTACA CCTTTGCTTC TGTCATAATA AAACCATTAT TTAAAGAC

Product

Productoaz1
DescriptionODC antizyme:1. Inhibition and targeting ODC for degradation; 2.Regulation of polyamine transport
Modifications224..226:ribosomal_frameshift
MVKSNLQRIL NSHCFAREKE GKKQCESSIM EALSSSITDR MASPTVCCSS TTGPGPLWCS DAPHPPLKIP GGRGNGARDH PSTTQTLYSD RKLTVTEEPA GPGRPQILHF QSRPAAARLI QWEAVLRGDG LFVEIPCEPF PDGSKESFIS LLEFAEEHLK VVSVFVCFYK NREDRVKLVR TFSFLGFEMV KPGHALVPAR PDVLFMAYNF DRDSSDED

Publications