Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200368"

Accession numberr200368 [export]
Locus nameoaz
Recode1 nameoaz_p_euk_pcar
DescriptionODC antizymes
Recode statusReviewed

Organism

Genomic classEukaryota (Chromosome)
OrganismPneumocystis carinii [details]

Sequence

GenBank IDsAF291574.1,AB161182.1,AB104619.1
SequencemRNA of 882 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 242)
DescriptionEfficiency of ODC antizyme biosynthesis is modulated by polyamine levels; sensor for an autoregulatory circuit.
GATTACATAA ATGGCTCATA ACAATACTAT TTATTACTTA AACAGTCAAG AAAGCGACTT AGACAACGAG ATTCTCATGT CTCCATGCTC TAAGGCCTTT GATAATGATA TGGAATATAG TTATTATGAT AATATTCCTT TAACATGCAC TGTGACTCCA TTGAAGCAAT TTGGTTCTTC ATCGGAGCCT CAGAAATATG TTTATCGTAG AATAAACTGT CGAAATATTC AATGGTGTCC CTGAGGTCTT GTGTGAATAT ACCCCCCCAG CATTTGCAGG AGCATCTTTG GATGCATCTG CCTTGGCCTC AGGGAAATAT GATCCGGCTG GTTCTTCGCA ATCTTCATCT CTTGAAAGTG ACTCAGGGTT TTCTGTGTTA AGAGAAAGAT TGATATGTGG AGTTTGGTGG AAGGAATTTG GTGTTGAAGA AAATAATGTG CTTCAAAGTG TTAGTATTAA TGAGAATAAT AAAGTATTAT GTCGTGGGAT AACAACGTTT TCCAAAAATG AGCATAATAT TTATATTATT GGAGATATTT GCAATAAGCC TTATTTAAAA CAAAGATTGG CTGCAATTAT TGATTTTGCT TCTAATTTTC TTTTTTGCAA TAAATTGTTT ATTCGTATTA GGAAAGTATC TTCTGGACTT GATGCCTTGA TTAGAGGTCT TACTTGGATC GGGTTTAGAA TTGTTCCTTC TGCTTCTTTT TCTTCTGAAT ATTATTTGCT ATTCAGTATT TGTTTGTAAC CTTTCATTGA AATATATGTT AAAGGTTTTC TAAATACTTT ATTTTTGCTA ATATGTTTTC TTTAAAATCT TAATTTTTTT TAACTGTTTA AAAAAAAAAA AAAAAAAACT CGAGGGGGGG CCCGGTACCC AA

Product

Productoaz
DescriptionODC antizyme:1. Inhibition and targeting ODC for degradation; 2.Regulation of polyamine transport
Modifications241..243:ribosomal_frameshift
MAHNNTIYYL NSQESDLDNE ILMSPCSKAF DNDMEYSYYD NIPLTCTVTP LKQFGSSSEP QKYVYRRINC RNIQWCPEVL CEYTPPAFAG ASLDASALAS GKYDPAGSSQ SSSLESDSGF SVLRERLICG VWWKEFGVEE NNVLQSVSIN ENNKVLCRGI TTFSKNEHNI YIIGDICNKP YLKQRLAAII DFASNFLFCN KLFIRIRKVS SGLDALIRGL TWIGFRIVPS ASFSSEYYLL FSICL

Publication