Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200374"

Accession numberr200374 [export]
Locus nameoaz
Recode1 nameoaz_p_euk_tmar
DescriptionODC antizymes
Recode statusReviewed

Organism

Genomic classEukaryota (Chromosome)
OrganismTorpedo marmorata [details]

Sequence

GenBank IDsAF291576.1
SequencemRNA of 1227 nucleotides [sequence]
OrganisationPseudoknot (1) [see structure]

Recoding event

Event type+1 Frameshifting (position: 311)
DescriptionEfficiency of ODC antizyme biosynthesis is modulated by polyamine levels; sensor for an autoregulatory circuit.
TTGCCCTTTT TCTTTTTTTA CAGATCATCA AGGAAGTAAT TATCTACTTT TTACAACAAA TATAAAACCA GCGGCCGCCA GTGTGAGTAA TTTAGGGTGG GCGGAGGGCG GCGTAAATCC GGGAGGCGGT TCCGTCTGCG GCCGGATGGT GAGAAGCTCC GTCGAACGGA TACTCAACAG CCACAACTTC GGTAAAGAGA GAGGACAGAG TCTCGTCAGG ATGATCAGCG GCCAGGAGAG TAATCCTTTG TGTGGTACCT CTCAGCAACA ATACTGCAGG CACCTCGGTC CAGGGCCTCT GTGGTGCTCC TGATGCCCCT CACCCATCAG TGAAGATCCC GGGTGGGCGA GGGAACGGAA GGGATCACAC TCTTGCAGCT CTCTTGCATG CGGATGAGAA GCTAACCGTA ACGCAAGAAC TACCAGCAAA TGGAAAACAA CATGTCATCC GCTTTCAGTA CAAGTTAACC GACTCTAAAG TCTCCAAATG GAATGCGTTT TTCTCCAATA ATGGTCTATT TGTAGAGATT CCTGATGGTA TTTTGGCAGA AGGAAGCAAG GAAGGGTTAA CTGTGCTGTT AGAATTTGCT GAAGAGAAGC TGAAGGTGGA GTATGTATTT GTCTACTTCT ACAAAAACAG AGAAGATCGA GCCATTCTTT TGAGGACATT CAGCTTCATG GGCTTTGAGA TTGTGAGACC AGGCCATCCC TCCGTTCCAG CCCAACCTGG TGTCTTGTTC ATGGTGTACT CCATTGATCA GTCGTTATCT GAGGAGGAGT AGCCATATGC TGTGTTTTCC TTTCTCCTTT TTAATGTTGC TCAATTAAAA GAAGATAGTC CTAAGTATAA ACGCTGTGTA ATACCCATAG CAGCAGCAGC CTGTAAAAGT TGCAAAATTT TGTTGTCTTT TTGCGTAAGC AAAATTTGTT CATCTTGCCT AGATGTTCTT TAGGCAGCCT GGGCTGAGTT CAGCTTCATG GATTCATACT GAGCAGTAAT TGTTGTCTTG AATTACAAAT TTGCCCAAAT TTTTTTGCCT TTGTTTCTTG AACTGTGTGA CTATTTGTCA TTGCTGTTTA CAGAACATGT TGAAAGCCTG TGCATTCCTT TCACATACTG TGTTTTTATG TACCTTGAAA GCTGTTTAAA AAAAAAAATA AAATATTTCA AATTTAAAAA AAAAAAAAAC TAAATTACTC ACACTGGCGG CCGCGATCAA TTTTCTT

Product

Productoaz
DescriptionODC antizyme:1. Inhibition and targeting ODC for degradation; 2.Regulation of polyamine transport
Modifications310..312:ribosomal_frameshift
MVRSSVERIL NSHNFGKERG QSLVRMISGQ ESNPLCGTSQ QQYCRHLGPG PLWCSDAPHP SVKIPGGRGN GRDHTLAALL HADEKLTVTQ ELPANGKQHV IRFQYKLTDS KVSKWNAFFS NNGLFVEIPD GILAEGSKEG LTVLLEFAEE KLKVEYVFVY FYKNREDRAI LLRTFSFMGF EIVRPGHPSV PAQPGVLFMV YSIDQSLSEE E

Publication