Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200377"

Accession numberr200377 [export]
Locus nameprfB
Recode1 nameprfB_p_pro_afer
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismAcidithiobacillus ferrooxidans [details]

Sequence

GenBank IDs
SequencemRNA of 1099 nucleotides [sequence]
OrganisationTrans/Interaction (1)

Recoding event

Event type+1 Frameshifting (position: 76)
DescriptionAutoregulation of RF2 biosynthesis.
ATGAGAGAAG TGAATGAGAT GCGTGCGCTG CACGACGATC TCCAGGTCCG TGTCGCGGGC CTGAGGGGGT ATCTTTGACC TCGAAGAAAA GCGCGGTCGC CTAGAAGAAG TTCAACGGGA GCTGGAAGAC CCGACCATCT GGAACAACGC CGAAAAGGCC CAGGAACTGG GTCGCGAGCG GTCTGCTCTG GAAGCTGTCA TTACGCCCAT GGACAAGCTC ACTGCGAGTC TCGCCGATGG CGGCGAGATG CTGGAGTTGG CGCTGAGCGA GCAGGACGCA GAACTCCTCG CCGCTGTCGA TGCGGATCTC GATACCGCGC TGTCTTTGGT CGAGAAGCTG GAATTCCAGC GCATGTTCTC CGGCGCGCAG GATGCGGCAA ACTGCTTTGT GGATATTCAG GCCGGCGCAG GCGGCACCGA GGCGCAGGAC TGGGCGGAAA TGATTCTGCG CATGTATCTG CATTGGGCGG AGTCCCATGG CTTTGCGGCG GAACTGGTGG AGGTCTCCGA GGGGGAAGTG GCGGGCATCA AGTCGGCCAG CATCCACGTG CGCGGTGACC ACGCCTTCGG CTGGCTGCGT ACCGAAACCG GCGTCCATCG TCTGGTGCGC AAATCGCCTT TCGACTCCGG CAATCGTCGT CATACCAGCT TCGCCAGCGT CTTTGTTTAT CCCGAAATTG ACGATAGTTT CGAGGTGGAT ATCAATCCGG CGGACCTCAA GGTGGATACC TACCGGGCCA GCGGGGCGGG TGGTCAGCAT GTCAACAAGA CCGACTCGGC CATTCGTATC ACCCATGTGC CCTCGGGCAT TGTCGTGGCC TGCCAGACCG ACCGCTCGCA GCATAAGAAC AGGGCCGAGG CCATGCGCAT GTTGCGCTCC AAGCTCTATG AGATGGAGAT GCAGAAACGT GCCGTCGAAA AGCAGGCGCT GGAAGACAGC AAAAGCGATA TCGGCTGGGG GCATCAGATC CGTTCCTATG TGCTGGACCA GTCGCGGATC AAAGACCTGC GCACCGGAGT CGAAGTGGGC GATACCCAGA AGGTGCTCGA TGGGGCGCTG GATATGTTCA TTGAAGCGGC GTTGAAGGCT GGATTGTAA

Product

ProductprfB
DescriptionPeptide chain release factor 2 (RF2), recognizes UAA and UGA stop codons
Modifications75..77:ribosomal_frameshift
MREVNEMRAL HDDLQVRVAG LRGYLDLEEK RGRLEEVQRE LEDPTIWNNA EKAQELGRER SALEAVITPM DKLTASLADG GEMLELALSE QDAELLAAVD ADLDTALSLV EKLEFQRMFS GAQDAANCFV DIQAGAGGTE AQDWAEMILR MYLHWAESHG FAAELVEVSE GEVAGIKSAS IHVRGDHAFG WLRTETGVHR LVRKSPFDSG NRRHTSFASV FVYPEIDDSF EVDINPADLK VDTYRASGAG GQHVNKTDSA IRITHVPSGI VVACQTDRSQ HKNRAEAMRM LRSKLYEMEM QKRAVEKQAL EDSKSDIGWG HQIRSYVLDQ SRIKDLRTGV EVGDTQKVLD GALDMFIEAA LKAGL

Publications