Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200381"

Accession numberr200381 [export]
Locus nameprfB
Recode1 nameprfB_p_pro_bhal
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismBacillus halodurans [details]

Sequence

GenBank IDsAP001519.1
SequenceDNA of 1102 nucleotides [sequence]
OrganisationTrans/Interaction (1)

Recoding event

Event type+1 Frameshifting (position: 73)
DescriptionAutoregulation of RF2 biosynthesis.
ATGGAATTAG TGGAAGTAAA GCAAGAATTA ACAACGATGG CTAAGCGATT AGCGGACTTT AGGGGGTCTC TTTGACCTCG AAACAAAGCA AGCGCGAATT GCTGAGTTAG AAGAAAAAAT GACAGCAGCT GATTTTTGGA ATGATCAAGC AGCTGCGCAA AAAGTCATTG ATGAGGCAAA CGCTCTAAAG GATACCGTCC ATACATTTTT AAAGATTGAA GAGACTTATG AGGACTTGGA AGTCTCCTAT GAGCTTTGTA AGGAAGAAAC GGATGCAGAC TTACAACAGG AATTAGAGCA AGGTCTAAAA GGTTTAGTGA AAGAATTAAA TGAGTTTGAA TTGCAGTTGC TGTTAAATGA GCCTTACGAT AAAAACAATG CCATTTTAGA GCTTCACCCA GGTGCGGGAG GAACAGAATC TCAAGACTGG GCTTCCATGC TGTTAAGAAT GTACACCCGT TGGGCAGAAA ACAAAGGCTA TAAAGTGGAG ACATTGGATT ATTTACCGGG GGATGAAGCT GGGGTCAAAA GTGTTACGTT ATTAATTAAA GGACATAACG CTTATGGCTA TTTGAAAGCG GAGAAAGGTG TACATCGTCT TGTGCGGATC TCTCCTTTTG ATTCGTCCGG ACGGCGACAT ACGTCGTTTG TTTCATGTGA AGTAATGCCG GAGCTTGACG ATAGTGTCGA GATTGAAATC TCAACGGAAG ATTTAAAAAT TGATACGTAT CGTTCTAGCG GTGCCGGTGG GCAGCATGTC AATACGACTG ATTCAGCTGT GAGAATTACC CACCTTCCGA CAAATACGGT TGTCACATGC CAAAGTGAAC GTTCACAGAT TAAAAACCGC GAACGAGCGA TGAAAATGTT ACAGGCCAAA TTGTTGCAGT TAAAGCTGGA GGAGCAGCAA AAAGAGTTGG CTGAAATCCG CGGGGAACAA AAAGAAATCG GTTGGGGAAG TCAAATTCGT TCATACGTAT TCCATCCATA TAGTATGGTA AAAGATCACC GTACGAATGT GGAAGTTGGG AATACGAATG CGGTGATGGA TGGAGAGATT GATTCCTTCA TCGACGCTTA CCTTCGGTGG AATGTCTCAT AA

Product

ProductprfB
DescriptionPeptide chain release factor 2 (RF2), recognizes UAA and UGA stop codons
Modifications72..74:ribosomal_frameshift
MELVEVKQEL TTMAKRLADF RGSLDLETKQ ARIAELEEKM TAADFWNDQA AAQKVIDEAN ALKDTVHTFL KIEETYEDLE VSYELCKEET DADLQQELEQ GLKGLVKELN EFELQLLLNE PYDKNNAILE LHPGAGGTES QDWASMLLRM YTRWAENKGY KVETLDYLPG DEAGVKSVTL LIKGHNAYGY LKAEKGVHRL VRISPFDSSG RRHTSFVSCE VMPELDDSVE IEISTEDLKI DTYRSSGAGG QHVNTTDSAV RITHLPTNTV VTCQSERSQI KNRERAMKML QAKLLQLKLE EQQKELAEIR GEQKEIGWGS QIRSYVFHPY SMVKDHRTNV EVGNTNAVMD GEIDSFIDAY LRWNVS

Publications