Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200383"

Accession numberr200383 [export]
Locus nameprfB
Recode1 nameprfB_p_pro_bper
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismBordetella pertussis [details]

Sequence

GenBank IDsBX640414.1
SequenceDNA of 1105 nucleotides [sequence]
OrganisationTrans/Interaction (1)

Recoding event

Event type+1 Frameshifting (position: 82)
DescriptionAutoregulation of RF2 biosynthesis.
ATGGAAGCCG AACGTCAGAA CCAGCTCGTC GCCCGACTCG AAGACTACGC GGAGCGCGAA CAGGCTCTAC GGAGGTATCT TTGACTACGA TGCCAAATCG GAACGCCTGC AAGTCGTAAA CGCCGAGCTC GAAGACCCGG CCATCTGGAA CGACCCCAAG CACGCCCAGG ACCTGGGCCG TGAAAAGAAA TCCCTCGAAG ACGTCGTCGA GACCCTGACC GAATTGGGCA GCGGCCTGGC CGACTCGTGC GAGCTCGTCG AACTGGCGCT GGCCGATAGC GACGACGCCA CGCTGGAAGC CATCGAGCAC GATGCCGACC GCTTCCAGGA AAAGCTGGAA ACGCTCGAAT TCCGCCGCAT GTTCGCCAAC CCGGCCGATC CGCTGAACTG CTTCGTCGAC ATCCAGGCGG GCGCCGGCGG CACCGAAGCG CAGGACTGGG CCTCGATGCT GCTGCGCCAG TACCTCAAGT ACGCCGAGCG CAAGGGCTTC AAGGCCGAAA TCCTCGAAGA ATCCGAGGGC GACGTCGCCG GCCTGAAGTC GGCCACCATC AAGATCGAAG GCGAGTACGC ATTCGGCTAC CTGCGCACCG AAACCGGCGT GCACCGCCTG GTGCGCAAGA GCCCGTTCGA CTCCTCGGGC GGCCGCCACA CCTCGTTTGC CAGCGTATTC GTCTACCCCG AGGTCGACGA GTCCTTCGAG GTCGAGGTCA ACCCGGCCGA CCTGCGCATC GACACCTACC GCGCCAGCGG CGCGGGCGGC CAGCACATCA ACAAGACCGA CTCCGCCGTG CGCATCACAC ACGCGCCATC GGGTATCGTG GTGCAGTGCC AGAACGACCG CTCGCAGCAT CGCAACCGGG CCGAGGCGAT GCAGATGCTC AAATCCAAGC TGTACGAGCT GGAAATGCGC AACCGCATGA CCGAGCAGCA GAAGCTGGAA GATTCCAAGA CCGACGTGGG CTGGGGCCAC CAGATCCGCT CGTACGTGCT GGACCAGAGC CGCATCAAGG ACCTGCGCAC CAACGTGGAA ATTTCCAATA CCCAGAAAGT GCTCGACGGC GACCTGGACC CGTTCATCCA AGCCAGCCTC AAGCAAGGCG TGTAA

Product

ProductprfB
DescriptionPeptide chain release factor 2 (RF2), recognizes UAA and UGA stop codons
Modifications81..83:ribosomal_frameshift
MEAERQNQLV ARLEDYAERE QALRRYLDYD AKSERLQVVN AELEDPAIWN DPKHAQDLGR EKKSLEDVVE TLTELGSGLA DSCELVELAL ADSDDATLEA IEHDADRFQE KLETLEFRRM FANPADPLNC FVDIQAGAGG TEAQDWASML LRQYLKYAER KGFKAEILEE SEGDVAGLKS ATIKIEGEYA FGYLRTETGV HRLVRKSPFD SSGGRHTSFA SVFVYPEVDE SFEVEVNPAD LRIDTYRASG AGGQHINKTD SAVRITHAPS GIVVQCQNDR SQHRNRAEAM QMLKSKLYEL EMRNRMTEQQ KLEDSKTDVG WGHQIRSYVL DQSRIKDLRT NVEISNTQKV LDGDLDPFIQ ASLKQGV

Publications