Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200392"

Accession numberr200392 [export]
Locus nameprfB
Recode1 nameprfB_p_pro_cpsi2
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismChlamydophila psittaci [details]

Sequence

GenBank IDsAE016994.1
SequenceDNA of 1108 nucleotides [sequence]
OrganisationTrans/Interaction (1)

Recoding event

Event type+1 Frameshifting (position: 70)
DescriptionAutoregulation of RF2 biosynthesis.
ATGCACGAAA GTTTAGATAA ACGGTTAGAA TGCTTAGTAG CTGGCTTGGC TTTAGCCGGG AGGTCTCTTT GACCTTGAAG GTAAGAGACA AGAGTTGACT GAATTAGAAG ATCAGACCTT GAAAGAGGAC TTCTGGCAAG ACGTTGCTCA TGCTGGAAAA GTTTCTGAAC GCGTCGCATC ATTAAAACGA CAAATTTCTG ATTATGAAGA ATTCAAAAGT AAGGTAGATA ACCTGACTTT TTTCTTAAAT GATAGTGAAG CTTCTTCAGA TCCCGAACTT CGTGAAGATT TAGAAAAAGA ATTTTCTGTT TGTGAAACTA TCCTTGCCGA ATGGGAAACG CAACGCTTAC TTTCTGGCGA GGTGGATAAA AATCCCTGCT TTTTAACGAT CAATGCTGGT GCGGGGGGGA CCGAGTCTTG TGATTGGGTG GAAATGCTTT TCAGGATGTA TTCTCGCTGG GCATCCCACC ATCAATGGAA AGCCGAGGTT ATAGATCGTC AAGAAGGGGA TGTCGCAGGG ATTAAGCATA TTACCGTAAA GTTTTCAGGA GAGTATGCTT ATGGTTATGC TAAAGCAGAG CGTGGTGTGC ATAGACTTGT GCGCATTTCC CCTTTCGATA GTAATGCGAA ACGTCATACA AGCTTTGCTT CCGTGGATGT CTATCCTGAA ATTGATGATG AGATAGAAAT TGATATCCGC CCAAATGATT TGCGTATTGA TACGTACCGA TCTTCAGGAG CTGGAGGACA GCACGTCAAT GTTACCGATT CTGCTGTGAG AATTACCCAT ATTCCCACAG GAATTATTGT TTCTTGCCAA AGTGAGCGCA GCCAAATCCA GAATCGTGAA AGCTGCATGA AAATGTTGCG CGCAAGAATG TATCAGCAGG TTCTTCAGGA ACGGTTAGAA AAGCAACTTC TTGATAGAAA AAATAAAAAA GAAATTGCTT GGGGTTCACA AATTCGTAAT TATGTTTTTC AGCCTTATAC TTTGGTCAAA GATATGCGTA CGGGGCATGA GACTGGCAAT GTGCAGGCTA TGATGGACGG AGAATTGCTA GATGATTTCG TCAAAGCGTA TTTAGCAGAG TATGGAGAAG CCTCATGA

Product

ProductprfB
DescriptionPeptide chain release factor 2 (RF2), recognizes UAA and UGA stop codons
Modifications69..71:ribosomal_frameshift
MHESLDKRLE CLVAGLALAG RSLDLEGKRQ ELTELEDQTL KEDFWQDVAH AGKVSERVAS LKRQISDYEE FKSKVDNLTF FLNDSEASSD PELREDLEKE FSVCETILAE WETQRLLSGE VDKNPCFLTI NAGAGGTESC DWVEMLFRMY SRWASHHQWK AEVIDRQEGD VAGIKHITVK FSGEYAYGYA KAERGVHRLV RISPFDSNAK RHTSFASVDV YPEIDDEIEI DIRPNDLRID TYRSSGAGGQ HVNVTDSAVR ITHIPTGIIV SCQSERSQIQ NRESCMKMLR ARMYQQVLQE RLEKQLLDRK NKKEIAWGSQ IRNYVFQPYT LVKDMRTGHE TGNVQAMMDG ELLDDFVKAY LAEYGEAS

Publications