Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200393"

Accession numberr200393 [export]
Locus nameprfB
Recode1 nameprfB_p_pro_ctra
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismChlamydia trachomatis [details]

Sequence

GenBank IDsAE001320.1
SequenceDNA of 1108 nucleotides [sequence]
OrganisationTrans/Interaction (1)

Recoding event

Event type+1 Frameshifting (position: 70)
DescriptionAutoregulation of RF2 biosynthesis.
ATGCATGAGA ATTTTGACAA ACGATTGGAA CTTTTGCTTG AAGGTTTGGC TTTAACTCGG AGGTCTCTTT GACCCGGAAG GAAAAGAAAA TGAGTTAAAG GAATTGGAAC AGCAGGCGGT GCAAGATGGT TTTTGGGACG ATGTTGTTCG TGCAGGGAAA ATTTCCGAAA GGATCGCTCG ATTAAAACAA CAGTTATCAG AATTTAATGA ATTAAAAAAC AAAGTTTCCG CGATACAATT CTTTTTAGAA GATGAAGAGT CTTCTAAAGA TTTAGAAATG CAAAAAGAAT TAGAAAAAGA ATTTGTTTTT TGTGAAAAGA AAATAACAGA ATGGGAAACA CTCAGACTTC TTTCTGGTGA GTTAGATCGA AATTCCTGTT TTCTATCCAT TAATGCAGGA GCAGGGGGGA CCGAATCTTG TGACTGGGTA GAGATGCTGC TGCGCATGTA TATGCGATGG GCTAGTAGTC ATAGCTGGAG GATAGAAGTG ATCGATCGAT TGGATGGGGA AGTCGCTGGG ATTAAGCATA TCACCCTGAA GCTCGTCGGT GAATATGCCT ACGGCTATGC TAAAGCAGAG AGCGGAGTGC ATCGTCTGGT ACGCATATCT CCTTTCGATA GCAATGCGAA ACGGCATACT AGTTTTGCAT CAGTAGAAGT GTTTCCAGAG ATTGATGATA AAATAGAAGT TGAGATCCGT CCCGGAGATA TTCGTATTGA TACGTATCGT TCTTCTGGAG CTGGAGGACA ACATGTAAAC GTAACAGATT CAGCGGTACG GATTACACAC TTCCCTACGG GAATTGTAGT GTCATGTCAG AATGAGCGTA GTCAAATTCA AAACCGAGAA GCTTGTATGA ATATGCTGCG CGCTAGGATT TACCAGAAGT TGTTACAAGA ACGTTTAGAG AAACAGAATA TAGATAGAAA AAATAAAAAA GAAATCAGCT GGGGATCTCA GATTCGTAAT TATGTATTTC AGCCTTATAC GCTGGTGAAA GATGTAAGGA CTGGATATGA AGTGGGCAAC ATCCAAGCAA TGATGGATGG GGAGCTCCTA GATGCTTTTA TCAAAGCCTA CCTGGTTGAT TATGGAGAAA TTACATGA

Product

ProductprfB
DescriptionPeptide chain release factor 2 (RF2), recognizes UAA and UGA stop codons
Modifications69..71:ribosomal_frameshift
MHENFDKRLE LLLEGLALTR RSLDPEGKEN ELKELEQQAV QDGFWDDVVR AGKISERIAR LKQQLSEFNE LKNKVSAIQF FLEDEESSKD LEMQKELEKE FVFCEKKITE WETLRLLSGE LDRNSCFLSI NAGAGGTESC DWVEMLLRMY MRWASSHSWR IEVIDRLDGE VAGIKHITLK LVGEYAYGYA KAESGVHRLV RISPFDSNAK RHTSFASVEV FPEIDDKIEV EIRPGDIRID TYRSSGAGGQ HVNVTDSAVR ITHFPTGIVV SCQNERSQIQ NREACMNMLR ARIYQKLLQE RLEKQNIDRK NKKEISWGSQ IRNYVFQPYT LVKDVRTGYE VGNIQAMMDG ELLDAFIKAY LVDYGEIT

Publications