Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200400"

Accession numberr200400 [export]
Locus nameprfB
Recode1 nameprfB_p_pro_hduc
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismHaemophilus ducreyi [details]

Sequence

GenBank IDsAE017152.1
SequenceDNA of 1147 nucleotides [sequence]
OrganisationTrans/Interaction (1)

Recoding event

Event type+1 Frameshifting (position: 76)
DescriptionAutoregulation of RF2 biosynthesis.
ATGTTTGAAT TAAATCCAAT TAGAACACAA TTAGCCGATT TAACTGAGCG TACACAGCTC ATTCGGGGGT ATCTTTGACT TTGATACCAA AGTTGAGCGC TTAGAAGAAG TCAATGCCGA ATTAGAACAG CCTGAAATTT GGAACACACC AGAAAAAGCG CAAACTTTAG GCAAAGAACG TTCTACTTTA GAAATGGTCG TAAATACGAT TAATGCGCTG ATTCAAGGTA TAGAAGATGT AGAAGCTTTA ATTGAATTAG CCGTTGAAGC CGAAGATGAA CAAACCTTAT ATGAAGCCCA AATAGAAGCG GACGAATTAG CCACAAAATT AGCCAAATTA GAATTTCAAC GAATGTTTAG CGGCCCCTAT GATGCAACTG ATTGCTATCT AGATTTACAA GCAGGCTCTG GTGGTACAGA AGCACAAGAT TGGACAGAAA TGTTATTACG TATGTATTTA CGCTGGGCAG AAAGTAAAGG TTTTAAAACA GAATTAATTG AAGTTTCTGA TGGCGATGTA GCCGGTTTGA AATCAGCCAC TATCCGTATA ACCGGTGAAT ATGCATTTGG TTGGTTACGT ACCGAAACAG GAATTCATCG CTTAGTGCGT AAAAGTCCAT TTGATTCAAA TAATCGTCGC CATACTTCTT TTGCGGCAGC TTTTGTCTAT CCAGAAGTGG ATGATGATGT AGATATTGAA ATTAATCCGG CAGATTTACG CATCGATGTT TATCGTGCTT CCGGTGCGGG GGGGCAACAC GTGAATAAAA CAGAATCCGC CGTGCGAATT ACTCATATGC CATCAGGTAT TGTGGTGCAA TGCCAAAATG GGCGTTCTCA ACATCAAAAT AAAGATCAAT GTATGAAACA GCTGAGAGCT AAATTATACG AAATGGAAAT GATGAAAAAG AACGCTGAAA AACAAGCAAT GGAAGAAAAT AAATCTGATA TTGGTTGGGG TAGCCAAATT CGATCATATG TATTAGATGA CTCTCGTATT AAAGATTTAC GTACCGGTGT TGAAAACCGT AATACACAAG CCGTACTAGA TGGTGATTTA GATAGGTTTA TTGAAGCCAG TCTAAAAGCT GGTTTATAAA ACAAGCGGTT ACTTTTACAG TTCATTTTTA CACAAAAATA AAAATAG

Product

ProductprfB
DescriptionPeptide chain release factor 2 (RF2), recognizes UAA and UGA stop codons
Modifications75..77:ribosomal_frameshift
MFELNPIRTQ LADLTERTQL IRGYLDFDTK VERLEEVNAE LEQPEIWNTP EKAQTLGKER STLEMVVNTI NALIQGIEDV EALIELAVEA EDEQTLYEAQ IEADELATKL AKLEFQRMFS GPYDATDCYL DLQAGSGGTE AQDWTEMLLR MYLRWAESKG FKTELIEVSD GDVAGLKSAT IRITGEYAFG WLRTETGIHR LVRKSPFDSN NRRHTSFAAA FVYPEVDDDV DIEINPADLR IDVYRASGAG GQHVNKTESA VRITHMPSGI VVQCQNGRSQ HQNKDQCMKQ LRAKLYEMEM MKKNAEKQAM EENKSDIGWG SQIRSYVLDD SRIKDLRTGV ENRNTQAVLD GDLDRFIEAS LKAGL

Publications