Recode v. 2.0 / Database of translational recoding events.
Details for "r200402"
| Accession number | r200402 [export] |
| Locus name | prfB |
| Recode1 name | prfB_p_pro_lmon |
| Description | Bacterial release factor 2 |
| Recode status | Reviewed |
Organism
| Genomic class | Bacteria (Chromosome) |
| Organism | Listeria monocytogenes [details] |
Sequence
| GenBank IDs | L32090.1 |
| Sequence | DNA of 281 nucleotides [sequence] |
| Organisation | Trans/Interaction (1)
|
Recoding event
| Event type | +1 Frameshifting (position: 73) |
| Description | Autoregulation of RF2 biosynthesis. this is a part of full gene, sequence of full gene was not available at the date of this entry |
ATGGAATTAG CAGAAATTCG TAATGAACTA GAGAAAACAG CACAGCAAAT CAAAGACTTT AGGGGGTCTC
TTTGACTTAG ACTGCATGGA AGTTCGAATT GCTGAGTTAG AAGACCAAAT GTTGGATCCG AATTTTTGGA
ACGACCAACA AGCAGCGCAA AAAGTAATCA ATGAATCCAA TGTATATAAA GAAACATACC AAGCGTTCCA
TGCGCTAGAA GAAGAACAAG AAAGCATGGA AATTAGTCTG GAACTGTTAA AAGAAGAAGC GGATGAAGAT
T
Product
| Product | prfB |
| Description | Peptide chain release factor 2 (RF2), recognizes UAA and UGA stop codons |
| Modifications | 72..74:ribosomal_frameshift |
MELAEIRNEL EKTAQQIKDF RGSLDLDCME VRIAELEDQM LDPNFWNDQQ AAQKVINESN VYKETYQAFH
ALEEEQESME ISLELLKEEA DED
Publications
- Baranov PV, Gesteland RF, Atkins JF. (2002) Release factor 2 frameshifting sites in different bacteria. EMBO Rep. 3(4):373-377. [abstract]
- Baranov PV, Gesteland RF, Atkins JF. (2002) Recoding: translational bifurcations in gene expression. Gene. 286(2):187-201. [abstract]