Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200403"

Accession numberr200403 [export]
Locus nameprfB
Recode1 nameprfB_p_pro_mlot
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismMesorhizobium loti [details]

Sequence

GenBank IDsAP002994.2
SequenceDNA of 1246 nucleotides [sequence]
OrganisationTrans/Interaction (1)

Recoding event

Event type+1 Frameshifting (position: 187)
DescriptionAutoregulation of RF2 biosynthesis.
ATGCGGATCG CTGGGCTGGC TGGGGGCCGG CCCATTTCGC TTTACACATG GCGGCGCCGT CCCTATGTAT CGCGCCGACC GAAGTGTCAC TTCAGCAACA GGACAAAATA CCAGGCCATG CGCGCGGAAA CGCAGAATAT TGTCGACGAG ATCAGGCAGG CGATAACCCT GCTGAGGAGG CATCTTTGAC TGGGATCAGG CCATAAAGCG GCTTGAATAC CTGAATGTGC GGGCCGAGGA CGCCAGCCTC TGGAACGAAC CGCTGGAAGC GCAGAAGCTG ATGCGCGAGC GTCAGGGCCT CGAGGAAGGC ATCGCGGCGG TCAAGGGCCT GACCCAGGCG CTGGAAGACA ATATCGGCCT GATCGAGCTC GGCGAGGAAG AGGGCGACGA GGGCGTCATC ACCGAGGCCG AAGCGGCGAT CCGCTCGATG CAGGGCGAGG CCAAGGCCCG CCAGGTCGAA ACGCTGCTGT CGGGTGAAGC CGACGCCAAC GACACCTATC TCGAAATCCA TGCCGGCGCC GGCGGCACCG AAAGCCAGGA CTGGGCCTCG ATGCTTTTGC GCATGTACAC GCGCTGGGCC GAACGCCGCC GCTTCAAAGT CGAAGTGCTG GAAGTGCATG ACGGCGAAGA GGCCGGCATC AAGTCCGCGA CGCTGATGAT CAAGGGCCAC AATGCCTATG GCTGGCTGAA GACTGAATCC GGCGTCCATC GCCTGGTCCG CATTTCGCCC TATGACAGCA ATGCGCGCCG GCACACTTCC TTCGCCAGCG TCTGGGTCTA TCCGGTCATC GACGACACGA TCGAGATCGA TGTTTCAGAA TCGGACGTGC GCATCGACAC CTATCGCTCG TCGGGCTCTG GCGGCCAGCA CGTCAACACC ACCGATTCGG CTGTGCGCAT CACCCATATC GCCACCGGCA TCGCGGTCGC CTGCCAGGCC GAGCGTTCGC AGCACAAGAA CCGGGCGAAG GCCTGGGAGA TGCTGCGCTC GCGCCTTTAC GAGGAAGAGC TGAAGAAGCG TGAGGCCATC GCCAACGCCA CCGAAGCCTC GAAGAGCGAC ATCGGCTGGG GCCACCAGAT CCGCTCCTAC GTGCTGCAGC CGTACCAGTT GGTGAAGGAT CTGCGCACCG GCGTCGAAAG CACCAGCCCG TCGAGCGTGC TCGATGGCGA CCTCGACGAC TTCATGGAAG CCTCGCTGTC GCAACGCATC GAAGGCGGCG CAGGCGAGGC CGTGGCGGAT CTGGAC

Product

ProductprfB
DescriptionPeptide chain release factor 2 (RF2), recognizes UAA and UGA stop codons
Modifications186..188:ribosomal_frameshift
MRIAGLAGGR PISLYTWRRR PYVSRRPKCH FSNRTKYQAM RAETQNIVDE IRQAITLLRR HLDWDQAIKR LEYLNVRAED ASLWNEPLEA QKLMRERQGL EEGIAAVKGL TQALEDNIGL IELGEEEGDE GVITEAEAAI RSMQGEAKAR QVETLLSGEA DANDTYLEIH AGAGGTESQD WASMLLRMYT RWAERRRFKV EVLEVHDGEE AGIKSATLMI KGHNAYGWLK TESGVHRLVR ISPYDSNARR HTSFASVWVY PVIDDTIEID VSESDVRIDT YRSSGSGGQH VNTTDSAVRI THIATGIAVA CQAERSQHKN RAKAWEMLRS RLYEEELKKR EAIANATEAS KSDIGWGHQI RSYVLQPYQL VKDLRTGVES TSPSSVLDGD LDDFMEASLS QRIEGGAGEA VADLD

Publications