Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200422"

Accession numberr200422 [export]
Locus nameprfB
Recode1 nameprfB_p_pro_ctep
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismChlorobaculum tepidum [details]

Sequence

GenBank IDsAE012958.1
SequenceDNA of 1096 nucleotides [sequence]
OrganisationTrans/Interaction (1)

Recoding event

Event type+1 Frameshifting (position: 70)
DescriptionAutoregulation of RF2 biosynthesis.
ATGTTTGACG CCGAAAAAGA TCGCCTGCAC CAGATCGAGC ACCGCCTGAA CCAGTTACGG GGGTATCTTT AACATCGATG AACGCAAAGA AAAGATAAGC GACCTGGAGA AGATTTCGGC AGCTCCCGAT TTCTGGAACG ACCAGAAAAC GGCCAACGCG CTGATTCTGG AGCTGAAAGA ACACAAGTCG TGGATCGATG AGTTCGACGA ACTCAGCACC GCGGTGCGCA ATGCAAGCGA GGAGATCGAG ATCGCCATCG AGCTCGAGGA TGAATCACTT GTGTCTGACC TCGACGCCAC GCTCGACCGC ATCGAGGAGA AGCTGGGCAA GATGGAGTTC CGCAAAATGC TTTCCGGCAA GGACGACGCA GGCAACGCCA TGATTATCAT TCACGCCGGT GCGGGCGGCA CCGAGGCGCA GGACTGGGCG GAGATGCTCT ACCGCATGTA CATGCGATGG GCCGAGCGCA AGGGCTTCAA GGTTTTTACC GACGACTACC AGGAGGGTGA GGGCGCGGGC ATCAAGAGTG CAACGCTTGA AATTATCGGA CCTTACGCCT ACGGCTATCT CAAAGCGGAG AATGGCGTGC ACCGGCTTGT CCGGGTGTCG CCCTACGACT CGAACGCCCG TCGCCACACC TCGTTCGCCA GCGTCTTCAC CTACCCGGAA GCACCGCCGG ACGTTGACAT CGAGGTGCGC AAGGAGGACC TCGAACTCTC CACCTTCCGC AGCGGCGGCA AAGGCGGCCA GAACGTCAAC AAGGTCGAAA CCGCCGTGCG CATCAAGCAT ATTCCGTCGG GCATCGTCGT CAGCTGCCAG GAGGAGCGCT CGCAGCTCCA GAACCGCGAG CGGGCGATGA AGATGCTCAT GGCCCAGCTC TACCAGCGCA GGCGTGAAGA GGAGGAGGCT AAAAAGCGCG AGATCGAGGG CAAGAAAAAG AAGATCGAGT GGGGCAGCCA GATTCGCAGC TACGTGCTCG ACGACCGCCG CATCAAGGAT CACCGCACCA ACTACGAGCG CTTCGACGTC GAAAACGTGC TCGACGGCGA CATCGACGAC TACATCCAGC GCTACCTCTC CGAATTCGGC GACTGA

Product

ProductprfB
DescriptionPeptide chain release factor 2 (RF2), recognizes UAA and UGA stop codons
Modifications69..71:ribosomal_frameshift
MFDAEKDRLH QIEHRLNQLR GYLNIDERKE KISDLEKISA APDFWNDQKT ANALILELKE HKSWIDEFDE LSTAVRNASE EIEIAIELED ESLVSDLDAT LDRIEEKLGK MEFRKMLSGK DDAGNAMIII HAGAGGTEAQ DWAEMLYRMY MRWAERKGFK VFTDDYQEGE GAGIKSATLE IIGPYAYGYL KAENGVHRLV RVSPYDSNAR RHTSFASVFT YPEAPPDVDI EVRKEDLELS TFRSGGKGGQ NVNKVETAVR IKHIPSGIVV SCQEERSQLQ NRERAMKMLM AQLYQRRREE EEAKKREIEG KKKKIEWGSQ IRSYVLDDRR IKDHRTNYER FDVENVLDGD IDDYIQRYLS EFGD

Publications