Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200459"

Accession numberr200459 [export]
Locus namefdhA-II
Recode1 namefdhA2_s_pro_eaci
Descriptionformate dehydrogenase
Recode statusValidated

Organism

Genomic classBacteria (Chromosome)
OrganismEubacterium acidaminophilum [details]

Sequence

GenBank IDsAJ312125.1
SequenceDNA of 2694 nucleotides [sequence]
OrganisationSECIS (1) [see structure]

Recoding event

Event typeSelenocysteine (position: 1045)
DescriptionSelenocysteine incorporation at UGA codon.
ATGATAAATG TGACAATAAA CGGCACGACG GTGAGCGTGC CCAGGAAGTC CACACTGCTT GAGGCATGCA ACGCTGCAGG CGTAAGCATC CCTACATTCT GCCACGACGA AAGACTACAG GCGCACGCGG CCTGCAGGAT ATGTGTTGTA GAAGTCGCGG GAGCCAGAGG CCTCATGACT GCATGCTCGA CTCCGGCGGT AGACGGAATG GACGTACAGA CTCACAGCGA AAGAGTAATC GAAGCAAGAA GAGGCGTTCT AAGCCTGATG ATAGCAAACC ACCCTCTTGA CTGCCTTACA TGCGTAAAAT CCGGAGACTG CAGACTTCAG GACTACTGCT ACGAGTACGG CGTCAAAGAG CCTGAATTCG AAGGTGCAAA GAAGAATTAT GAAATAGACG ATTCGAATCC TTTCTATATA AGCGACCAGA ACAAGTGCAT AAGCTGCGGA AGATGCGTAA GGGTATGCAA CGAGCTTCAG TGCACTGGCG CAATAGACCT GGCTGAAAGG GGTTTTGACA CACACGTGGC AACTCCTTTT GATGTGGATC TTGAAAAGTC CAAATGCGTA TCCTGCGGAA ACTGCGTTGC CGTTTGCCCT GTCGGAGCCT TGATGCCAAA GAGCAAGGAG CTCTTCAGGC AATGGGAGAC TAAAAAGGTA AGAACTACAT GCTCATATTG CGGCGTAGGC TGCCAGATGG ATCTTGTAGT AAAAGGCGAC ACTGTGGTAG GCGCAGAGCC AGCCAACGGA CCTGCCAACG AGGGACTTTT GTGCGTCAAG GGAAGATTCG GCTACAAGTT CCTTAGCCAC CCGGACAGGC TCACAAAGCC TCTTATAAGA AAGAACGGGG AGCTTGTGGA GTCTTCCTGG GACGAGGCAT ACAGCCTTGT TGCAAAGAAG ATGAAGCAGA CAAAGGAAGA ATTCGGAGCT GATTCGCTAG TTGGGCTTAC ATCTGCAAGA TGTACAAATG AGGAAAACTA CCTCATGCAA AAGCTTTTCA GAGCCGTAAT AGGCACTAAC AACATCGATC ACTGCGCACG CCTCTGACAC TCCTCAACGG TTGCAGGTCT TGCAGCCACA CTGGGAAGCG GAGCGATGAC AAACAGCATA ACTGAAGTCA AGGATTCAGA CGCGATATTC GTAATAGGCT CCAACACTAC AGAAAACCAC CCTGTAATAG GCGCAATGAT GAAACAGGCG GTTAAGAAGG GCGCAAAGCT GATAGTTGCC GAGCCAAGAA GGATAGAGCT TGCCGACTAC GCTGACGTTT TCCTTCAGAT AAAGCCTGGA ACAAACGTAG CGCTTCTAAA CGGCATGATG AAAGCCATAG TAGACGAGGA CCTTCATGAC AAGGAATATA TAGAAGAAAG AACAGAGGAC TTCGACAAGC TAAAAGAACT TCTCGGCAGA CATACTGTTG AAGAATACGC AGCTATATGC GGCGTAGATG CAGAGGATGT AAGGAAAGCG GCCAGAATAT ACGCAGAGGC CGACAAAGCC GGAATATACT ACGCAATGGG CATAACTCAG CACAGCGACG GAACAAACCA CGTCAAGTCG GTTTCAAACC TTGCTCTGCT TTGCGGAAAC CTAGGAAAGG AATCTGCCGG AGTCAACCCT CTAAGAGGAC AAAACAACGT GCAGGGAGCC TGCGACATGG GCGGACTTCC AAACTCGTTC CCCGGCTACC TGAGCGTCAC TTCTCCAGAA ATTCGCGAGA AATTCGAGAA GGCCTGGGAC GCCAAGCTCT CTGGCAACGT GGGACTCACC ATACCTAAGA TGCTAAGCGG AATAGACAGC GGCGATGTAA GGCTTATGTA TATAATGGGC GAGAACCCTA TGGTTTCAGA CCCGGACCTT ACTCACGTCG AAAAATCTCT AAGGAAAGTG GACTTCCTCG TAGTTCAGGA CATATTCCTC ACAGAGACTG CACTGCTTGC TGACGTTGTG CTTCCTGCAG CCGCCTTTGC AGAAAAAGAC GGAACCTTCT CAAATACAGA AAGAAGAGTC CAGATGGTAA GAAAGGCTGT GAATCCTCCG GGGGAAGCCA AGGCCGACTG GAAGATATTC ATGGACCTTA TGAACAAGCT TGGATATTCC AACTACTACA GAAATACAAG CGAGATAATG GATGAGATAG CATCAGTTAC CCCTCAGTAC GGCGGCATAA GCTACGACAG GCTTGAAGAA AAAGGAAGCC TGCAGTGGCC TTGCCCGACA AAGGAGCACG AGGGCACGAA ATTCCTGCAC AAGGGCCAAT TCGCAAGAGG CAAGGGACTT TTCACAGCCG TAGAGTACAA AGGACCTGCA GAGATTACAG ACGAGGAGTA CCCTCTGATA CTTACAACAG GAAGGGTTCT ATACCACTAC CACACAATGA CAATGACAGG CAAGGTAGAG GGCCTCATGC AGAAATCCCC GGAAAGCTTC ATAGAGCTTT CGCCAAATGC AGCTGAAAAC CTTGGCGTTG CTGACGGCGA AATGGTGAAG GTATCATCAA GAAGGGGCAC AATAAATGTA AAAGCCGCAG TCAAGGATAT ACTAGCTGAC AACGTGGTGT TCATGCCTTT CCACTTTGCT GTGGGAGCGG CCAACATGCT TACAAACACA GCTCTGGATC CGACCTGCAA CATACCTGAA TTCAAGGTCT GCGCAGTGAA GGTTGAAAAA ATAGCCACAG AAAAGACAGC TTAA

Product

ProductfdhA2
Descriptioncatalytic subunit of formate dehydrogenase
Modifications1045..1047,aa:Sec
MINVTINGTT VSVPRKSTLL EACNAAGVSI PTFCHDERLQ AHAACRICVV EVAGARGLMT ACSTPAVDGM DVQTHSERVI EARRGVLSLM IANHPLDCLT CVKSGDCRLQ DYCYEYGVKE PEFEGAKKNY EIDDSNPFYI SDQNKCISCG RCVRVCNELQ CTGAIDLAER GFDTHVATPF DVDLEKSKCV SCGNCVAVCP VGALMPKSKE LFRQWETKKV RTTCSYCGVG CQMDLVVKGD TVVGAEPANG PANEGLLCVK GRFGYKFLSH PDRLTKPLIR KNGELVESSW DEAYSLVAKK MKQTKEEFGA DSLVGLTSAR CTNEENYLMQ KLFRAVIGTN NIDHCARLUH SSTVAGLAAT LGSGAMTNSI TEVKDSDAIF VIGSNTTENH PVIGAMMKQA VKKGAKLIVA EPRRIELADY ADVFLQIKPG TNVALLNGMM KAIVDEDLHD KEYIEERTED FDKLKELLGR HTVEEYAAIC GVDAEDVRKA ARIYAEADKA GIYYAMGITQ HSDGTNHVKS VSNLALLCGN LGKESAGVNP LRGQNNVQGA CDMGGLPNSF PGYLSVTSPE IREKFEKAWD AKLSGNVGLT IPKMLSGIDS GDVRLMYIMG ENPMVSDPDL THVEKSLRKV DFLVVQDIFL TETALLADVV LPAAAFAEKD GTFSNTERRV QMVRKAVNPP GEAKADWKIF MDLMNKLGYS NYYRNTSEIM DEIASVTPQY GGISYDRLEE KGSLQWPCPT KEHEGTKFLH KGQFARGKGL FTAVEYKGPA EITDEEYPLI LTTGRVLYHY HTMTMTGKVE GLMQKSPESF IELSPNAAEN LGVADGEMVK VSSRRGTINV KAAVKDILAD NVVFMPFHFA VGAANMLTNT ALDPTCNIPE FKVCAVKVEK IATEKTA

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