Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200461"

Accession numberr200461 [export]
Locus namefdhA
Recode1 namefdhA_s_pro_mthe
Descriptionformate dehydrogenase
Recode statusProvisional

Organism

Genomic classBacteria (Chromosome)
OrganismMoorella thermoacetica [details]

Sequence

GenBank IDsU73807.1
SequenceDNA of 2682 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 1072)
DescriptionSelenocysteine incorporation at UGA codon.
ATGGTTAACC TGACCATTGA CGGACAAAGG GTTACGGCTC CAGAGGGCAT GACCATCCTG GAGGTGGCCC GGGAAAATGG TATCCATATC CCCACCCTGT GCCACCATCC AAAGTTGCGG CCCCTGGGGT ATTGCCGTCT GTGCCTGGTC GACATCGAGG GCGCCGCAAA ACCCATGACG GCCTGCAATA CGCCGGTCGC CGAGGGTATG GTGATCCGGA CCAGCACGCC TGTTATAGAG GAGATGCGCA AGGGTATTAT TGAAATGCTT TTAAGCCTCC ACCCGGAGGA CTGCCTGACC TGCGAAAAAG CAGGTAACTG CCAGCTCCAG GATTGCGCCT ACACTTACGG TGTAAAGCAT GGCGAACTGC CAGTAAAACG CGAGGAATTG CCCGTTTTGA AGGAAAATCC CTTCATTGTG CGGGATTATA ATAAATGTAT CGTTTGCGGC CGTTGCGTCC GCGCCTGCCA GGAGGTGCAG GTCCAGAGGG TCGTGGACCT GGTGGGTAAA GGCAGCGCCG CCCGGGTGGG GGCGACGAAG GCCGGAGCGG AAGTAAGCCT GGAAGAAGGG GGCTGCGTCT TTTGCGGTAA CTGTGTCCAG GTCTGCCCGG TGGGAGCTCT GACGGAGAAG GCCGGCCTGG GCCAGGGCCG CGAGTGGGAG TTCAAAAAAG TCCGCAGTAT TTGTTCTTAC TGCGGCGTGG GTTGTAATCT CACCCTTTAT GTAAAAGATG GTAAGGTGGT AAAAGTTAGG GGTTACGAAA ACCCTGAGGT AAACAACGGC TGGCTGTGCG TAAAAGGCCG CTTTGGTTTT GACTATATTC ACAATCCTGA CAGGATAACC AGGCCGTTGA TCCGGGAGGG AGATAGGGAA AAAGGCTATT TCCGGGAGGC TTCCTGGGAA GAAGCTTTAG CCCTTGTATC CCAGAAATTA ACTCAGATTA AAGGCAGCTA CGGCTCTGAA GCTCTGGGCT TTCTTTGTTC AGCTAAATGT ACCAATGAAG AGAATTATCT CTTACAAAAG CTGGCCCGGG GGGTACTGGG CACCAATAAT GTTGATCACT GTGCTCGCCT CTGACACTCT TCTACAGTTG CCGGTCTGGC AACAACCTTT GGCAGCGGTG CAATGACCAA TTCTATCGCT GACATCGCCA GCGCAGATTG TATCTTTGTC ATTGGCAGCA ATACAACCGA GAACCATCCT GTTATTGCCC TTAAAGTAAA AGAAGCTGTC CGTCGTGGAG CCAGGCTCAT TGTTGCTGAT CCCCGGCGTA TTGAACTGGT GAACTTCAGT TACTTGTGGT TAAGACAAAA ACCCGGAACA GATCTTGCTC TGCTGAATGG ACTGCTTCAT GTAATCATCA AGGAAGAGCT TTATGACAAA GAATTTATTG CCCAGAGGAC GGAAGGTTTT GAGGCTCTAA AACTTGCCGT AGAGGAGTAT ACACCAGCAA AGGTGTCAGA AGTTACAGGT GTTCCGGCAG GCGATATTAT CGAGGCAGCA AGGACTTATG CCCGGGGTCC GAGCTCTACT ATTTTGTACG CAATGGGAAT AACCCAGCAT ATAACTGGTA CGGCCAACGT GATGGCCCTG GCCAACCTGG CCATGGCCTG TGGTCAGGTC GGTAAAGAAG GTAACGGCGT AAATCCCCTG CGGGGGCAGA GCAATGTCCA GGGTGCCTGC GATATGGGTG GATTACCCAA TGTATTACCG GGATACCAAC CAGTAACAGA TCCGGGGGTT CGCCATAAAT TTAGCGAAAC CTGGGGGGTA CCGGACTTAC CCGGAGAACC TGGCCTGACA TTAATGGAGA TGATGGCGGC AGCCCAAGAA GGCAAATTGA AAGGGATGTA TATTTTAGGA GAAAACCCTG TCTTGACTGA TCCAGATGTC TCCCATGTAA AAGAGGCGTT AAAGAACCTG GAGTTTCTGG TGGTACAGGA TATTTTTTTG ACGGAGACAG CCAGGATGGC GGATGTTGTT TTACCTGGAG CTTCCTTTGC GGAAAAGGAA GGTACCTTTA CCAGTACGGA GCGCCGGGTG CAGCTTTTGC ATAAAGCCAT TGAACCTCCC GGTGAAGCAC GGCCGGATTG GCTTATTTTA AACGATTTGT TGCTGTTAAT GGGATATCCG CGGAAATATT CGTCGCCTGG GGAGATAATG CAGGAGATAG CAGGGTTAAC TCCCAGCTAT GCGGGTATAA CTTATGAGCG CCTGGAAGAT AAAGGGTTAC AGTGGCCGGT GCTTTCCCTC GAACATCCGG GTACACCCGT TCTCCATCGG GAAAAATTTA GCAGAGGTTA TGGGCAGTTC CAGGTAGTGC ATTACCGGCC GCCGGCCGAA GAACCTGATG AAGAGTACCC GTTCTTATTT ACCACTGGCA GGAATTTGTA TCACTATCAT ACTGTTATTT CCCGTAAGTC CAGGGGGCTG GAAGAGATGT GTCCTGCTCC TGTGGTGGAG ATTAATGATA ACGATGCAGC CCGTTTGGGT ATACGGGAAG GAGAAATGAT TGAGATTGTT TCCCGACGTG GTAAAGTAAG GGTTAAAGCA TTGGTTACGG ATCGCATACC CCGGGGCCAG GTATTTATGA ATTTCCATTT CCATGAAGCA GCAGCCAACC TGCTTACAAT TGCTGCCCTG GATCCGGTTG CTAAAATACC GATTATAAAA CCTGTGCTGT AG

Product

ProductfdhA
DescriptionFormate dehydrogenase alpha subunit
Modifications1072..1074,aa:Sec
MVNLTIDGQR VTAPEGMTIL EVARENGIHI PTLCHHPKLR PLGYCRLCLV DIEGAAKPMT ACNTPVAEGM VIRTSTPVIE EMRKGIIEML LSLHPEDCLT CEKAGNCQLQ DCAYTYGVKH GELPVKREEL PVLKENPFIV RDYNKCIVCG RCVRACQEVQ VQRVVDLVGK GSAARVGATK AGAEVSLEEG GCVFCGNCVQ VCPVGALTEK AGLGQGREWE FKKVRSICSY CGVGCNLTLY VKDGKVVKVR GYENPEVNNG WLCVKGRFGF DYIHNPDRIT RPLIREGDRE KGYFREASWE EALALVSQKL TQIKGSYGSE ALGFLCSAKC TNEENYLLQK LARGVLGTNN VDHCARLUHS STVAGLATTF GSGAMTNSIA DIASADCIFV IGSNTTENHP VIALKVKEAV RRGARLIVAD PRRIELVNFS YLWLRQKPGT DLALLNGLLH VIIKEELYDK EFIAQRTEGF EALKLAVEEY TPAKVSEVTG VPAGDIIEAA RTYARGPSST ILYAMGITQH ITGTANVMAL ANLAMACGQV GKEGNGVNPL RGQSNVQGAC DMGGLPNVLP GYQPVTDPGV RHKFSETWGV PDLPGEPGLT LMEMMAAAQE GKLKGMYILG ENPVLTDPDV SHVKEALKNL EFLVVQDIFL TETARMADVV LPGASFAEKE GTFTSTERRV QLLHKAIEPP GEARPDWLIL NDLLLLMGYP RKYSSPGEIM QEIAGLTPSY AGITYERLED KGLQWPVLSL EHPGTPVLHR EKFSRGYGQF QVVHYRPPAE EPDEEYPFLF TTGRNLYHYH TVISRKSRGL EEMCPAPVVE INDNDAARLG IREGEMIEIV SRRGKVRVKA LVTDRIPRGQ VFMNFHFHEA AANLLTIAAL DPVAKIPIIK PVL