Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200462"

Accession numberr200462 [export]
Locus namefdhA
Recode1 namefdhA_s_pro_wsuc
Descriptionformate dehydrogenase
Recode statusProvisional

Organism

Genomic classBacteria (Chromosome)
OrganismWolinella succinogenes [details]

Sequence

GenBank IDsNP_906953.1
Sequence of 2832 nucleotides [sequence]
OrganisationSECIS (1) [see structure]

Recoding event

Event typeSelenocysteine (position: 562)
DescriptionSelenocysteine incorporation at UGA codon.
ATGAGTGAGA ATATCGTTCA AACACTCTCT CCGCTCAAAG TGGGTCGAAG AAGCTTCCTG AAAATGGCAG CTTTGGCAGG CGCAATGGGC GCGAGTAGTG CGGTAGCTTC TGAAGGCGTG GTGCGAAGCG CTACGACTCA AGAGCTCAAA GAGGCGCATC CAGGTGCTAA GAAAATAAAA ACCATCTGTA CGGCTTGCTC TGTAGGCTGT GGAATCGTCG CTGAAGTGAA AAATGATGTG TGGGTGCGCC AAGAGGTTGC CCAAGATCAC CCTATCAGCC TTGGCGGGCA CTGCTCTAAG GGTGCGGGCA TGATTGATGT GCTTCGAAGC CCCAAGCGTG TCAAATACCC CATGAAAAAA GAGAATGGCA AGTGGAAACG CATCAGCTGG GATCAAGCGA TGGATGAGAT TTCCGCAAAG ATGCTTCAGC TAAGAACAGA CTTTGGCCCC GATGCGGTTC AATTTTTTGG TTCAGCTAAA GTTTCAACCG AGCAAGCGTA CTACATCCGA AAGTTTGCTG CTTTCTGGGG AACCAACAAC GTAGATCACC AAGCTAGAGT TTGACACAGC TCCACAGTCG CCGGTGTGGC GAATACTTTT GGTTATGGAG CTATGACCAA CCATTTGGCC GATATTCAAA AGTCCAAAGC AATCATTATT TTTGGTGCCA ACCCTGCGGT GAATCACCCT GTAGGATTCC AGCACTTCCT CAAAGCTAAA GAGATCAATG GTTCTAAGCT CATCGTCGTT GAGCCTCGAT TCACTCGAAC CGCCGCTAAA GCTGATATGT TTGCCCAGAT TCGACCTGGA ACCGACATCC CCTTTATGTA TGGAATGATC AACCTGATCC TCAAAAATGG ATGGGAAGAT AAGAAATTCG TCGCTGAGAG AACTTTCGGT TTTGAAGAGA TCGCCAAAGA GGCGGCTAAG TACACCCCTG AAGTGGTCGA AGATATCACA GGCGTCCCTG CACAGCAGCT CATCGATATA ACACGAGTTT ATGCCCAAAC CAAACCTGGA ACGCTCATTT GGGCGATGGG TCTCACTCAG CACACGATTG GAACCAGCAA TACACGACTA GCCCCGATTC TTCAGCTCAT TCTTGGAAAT ATGGGTAAAC CAGGCGGTGG TACCAACATC CTTCGAGGCC ATGATAATGT TCAGGGCGCG AGTGATATGG GATGCTTGGC TGAAAACCTC CCTGGCTATT TCCCTAACGC TGAACCGAGC TTCAAGCACT GGGCGAATGT CTGGCAGGTC GATTTTGAGT GGCTCAAGGC TCGATTCGCT CCTGATATGA TGTTCAAAAA TGGATTCTCC CTTTCTCGAT GGTGGCAAGG GGTTCTTGAA GAAGAGACGA TTCATAACGG TCCTGCAGGC AAGCTTCGTG CGATGGTCTG TATGGGGAAT GGTCTAATCT CTGTCGCCCA GACTGAGAAG GTGAAGCAAG CACTTGATAA GCTAGAGCTT TTCGTCATGA TCGATATCTT CCCTCATGAT GCGATCGCCT ATACCGATCG AAAAGATGGA GTCTATCTGC TTCCTGCGGC TAGCCAGTAT GAGACTAGTG GAACCGTCAC GGCGACCAAT CGATCAGGTC AATGGCGATA CCAAGTGGTC AATCCTATCT ATGAGAGCAA AGCCGATCAA GATATTCTCT TTGCTTTTGC GAAGAAGTTT GGCTTCTACA ACGAATATGT AAGAGCCTTG GGCGATGGCA AAGGAAACTT TGTATGGCCT GAAGATGCCA CGCGAGAGAT CGCTAAAGGG GTGAAAACCA TCGGACTTAG CGGCTGGCTT CCTGAGAGAT TGAAGGCTCA CACGGATAAC TGGCATATGT TTGATGAGCT GACCTTGGAG GGCAAAGGGC CTATGAAGGG CGAATACTAT GGTCTTCCTT GGCCTTGCTG GAGCGATAAA CACCCTGGAA CCCCTAACCT CTATGACAAC TCTCTCCCTG TAATGAAGGG CGGTATGGGC TTTAGGAATA ACTTCGGTCT CAAGCAAGAG CTCAATGGAG TGGAGTATGA TATGCTCGCC TCCGAAGGCA GTGTTCCTCC TGGAGGCACC CAAAAAGGGG GTTATCCTGC TATCACCGCC GCCAATATTG AAGCTCTAGC GGGAATCACC CTCACTGAAG AGGAGAAGGC CAAAGTGGCA GGTAAAGCTT GGCACACCGA CCTCTCCATG ATTCTAGTCA ACAAAGCGCT TGAAGCGGGT CTCTGCCCCT ACGGTAATGC ACGGGCTAGG ATGTTTGTCA AAGAGTGGGC GGATCAGATT CCTCGCCACC GAGAGCCTCT CCATAGCCCA AGAACGGATA TGGTGGCTAA ATACCCAAGC TTCAAAGACA AGCCCAACCA CTTTAGGGTT GACACGAAGT ATGAGAGCAT CCAGATGCAA AAAGATTGGG CGAAAGAGTT CCCTCTCAAC CTTATCACGG GTCGATTGGT CACTCACAAC GGTCAAGGAA TCGAATCGAG AATCTCTCCC GCTCTAAGCG AGATCTATCC TGAGATGTTT ATCGAGATTC ACCCTGATCG AGCGCTCAAG CTTGGAATCA AAGATGGCGA CATGGTCTGG GTTCACTCAC CTGAGGGCAC CAAAGGCTAC ATGAAAGCCA AATATAGCTA CAGCATCAAA GAAGATTGTG TATTCGCTCC TTTCCACTGG GCGGGTATCC ATCAAGGCAA GGATTTGAGC AAGAATTATC CCGAGGGCTT GGTTCCCTAT AGCGTGGGTG AAAGCATCAA CACTGTCACC AACTACGGCT ATGACATCGT GACTCAGATT CCTGAAACTA AAGGCGGCCT CTGCCGCATC GAAAAAGCGT AG

Product

ProductfdhA
DescriptionFormate dehydrogenase alpha subunit
Modifications562..564,aa:Sec
MSENIVQTLS PLKVGRRSFL KMAALAGAMG ASSAVASEGV VRSATTQELK EAHPGAKKIK TICTACSVGC GIVAEVKNDV WVRQEVAQDH PISLGGHCSK GAGMIDVLRS PKRVKYPMKK ENGKWKRISW DQAMDEISAK MLQLRTDFGP DAVQFFGSAK VSTEQAYYIR KFAAFWGTNN VDHQARVUHS STVAGVANTF GYGAMTNHLA DIQKSKAIII FGANPAVNHP VGFQHFLKAK EINGSKLIVV EPRFTRTAAK ADMFAQIRPG TDIPFMYGMI NLILKNGWED KKFVAERTFG FEEIAKEAAK YTPEVVEDIT GVPAQQLIDI TRVYAQTKPG TLIWAMGLTQ HTIGTSNTRL APILQLILGN MGKPGGGTNI LRGHDNVQGA SDMGCLAENL PGYFPNAEPS FKHWANVWQV DFEWLKARFA PDMMFKNGFS LSRWWQGVLE EETIHNGPAG KLRAMVCMGN GLISVAQTEK VKQALDKLEL FVMIDIFPHD AIAYTDRKDG VYLLPAASQY ETSGTVTATN RSGQWRYQVV NPIYESKADQ DILFAFAKKF GFYNEYVRAL GDGKGNFVWP EDATREIAKG VKTIGLSGWL PERLKAHTDN WHMFDELTLE GKGPMKGEYY GLPWPCWSDK HPGTPNLYDN SLPVMKGGMG FRNNFGLKQE LNGVEYDMLA SEGSVPPGGT QKGGYPAITA ANIEALAGIT LTEEEKAKVA GKAWHTDLSM ILVNKALEAG LCPYGNARAR MFVKEWADQI PRHREPLHSP RTDMVAKYPS FKDKPNHFRV DTKYESIQMQ KDWAKEFPLN LITGRLVTHN GQGIESRISP ALSEIYPEMF IEIHPDRALK LGIKDGDMVW VHSPEGTKGY MKAKYSYSIK EDCVFAPFHW AGIHQGKDLS KNYPEGLVPY SVGESINTVT NYGYDIVTQI PETKGGLCRI EKA

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