Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200464"

Accession numberr200464 [export]
Locus namenull
Recode1 namefdh_s_pro_ddes
Descriptionformate dehydrogenase
Recode statusProvisional

Organism

Genomic classBacteria (Chromosome)
OrganismDesulfovibrio desulfuricans [details]

Sequence

GenBank IDsNZ_AABN02000003.1
SequenceDNA of 2160 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 400)
DescriptionSelenocysteine incorporation at UGA codon.
ATGAAAGAAG TATTAACAAC GTGTCCTTAC TGCGGTACAG GGTGCGCTTT TTACCTTCAG GTGCATGACG ATACTGTGAC AGGAGTCCGT CCGGCCGTCA GCAACACGGT GAATAAAGGC AGGCTGTGTT CCAAGGGGCA TTTCGGCTTT GATTTCATTC ACCATGGTGA CCGGCTGAAA ACTCCGCTTA TCCGCAGGGA TGGCCGGCTG GTGCCCTGCA GCTGGGAAGA AGCCTACGAT TGTATCACAT CGCGGCTTTC AGAGATTATC CGTCAGAGCG GGCCCGATGC CGTGGCAGGG TTCAGTTCCG CCCGTTGTAC CAACGAAGAA AATTATCTGA TGCAGAAGTT CATGCGTGCG GCCGTCGGCA CCAATAATGT CGACCACTGC GCCCGTCTCT GACACGCTCC CACCGTGGCC GGTCTGGCCG CAGCATTCGG AAGCGGAGCC ATGACGAATT CCATTGATGA ACTGGAGAGC ATGGGGGCCG GCGATGTGAT TTTTGCCGTG GGTACAAACA CCACGGAATG CCATCCGGTC ATAGGGGCCA ATATGCTTCA GGCCGTGCGT CAGGGGGCCC GTCTGGTGGT GGCCGACCCG CGCGCCGTTA CGCTTGCGGC GCACGCCGCG GTGTGGCTGC GTCTGCGTCC CGGCACTGAT GTGGCGCTGC TGAACGGCAT TGCTCATGTG ATTATTTCCG AAGGTCTTGC CGACGAGGCA TTCATCGCGC AGCGCACCGA AGGATATGCG GCGTTCCGCG AAACCGTGCT GCGCTGCACG CCGCAAAAGG CATCGGCAAT CACAGGCGTA CCGGCGGACG ACATCCGCTC CGCGGCACGC ATTCTGGGCT GCGCCGCCAA CGTCTCCACC TATTACACCA TGGGCATCAC GCAACACACC TCCGGCGTGG ACAATGTGCG CGCCGTGGCC AACATCGCGC TGCTTACCGG TAATGCGGGG CGGCCGGGTA CAGGGGTCAA TCCGTTGCGC GGACAGAACA ATGTGCAGGG CGCATGCGAT ATGGGTGCCC TGCCCGATGT TTTGCCCGCG TACCAGCGCG TGACCGACCC TGCCGTGCGT GAGCGCTTTG CGGCCGCGTG GGGCAGAGAA GTTCCCGGAA AGCCGGGGTT GCGCATACCT GACGTGCTGC ACGGGCTGGA ACACGGCACT GTGCGGGCTT TGTATGTTTT TGGTGAAAAT CCCATGCGCA GCGATCCTGA TGTGGGCCAT GTGGAACACT GTCTGGACGC TGCGGAGTTT CTGGTGGTGC AGGATATTTT TCTTACCGAG ACAGCCGCAA AGGCGCATGT GGTGCTGCCG GGAGCGTCCT TTGCCGAAAA GGACGGCACG TTTTCCAGTA CCGAACGCAG GGTGCAGCGC ATCCGCAGGG CGGTGCCCCC CGCAGGCGGC AGCCGCCCGG ACTGGCAGAT ACTCAGCGAG CTTCTGACCC GTATGGGGGC AGGGCCGGAG TATGGTTCGC CGGAGGAAAT ATTTGACGAA ATGCGGGCGC TGACCCCCAG TTACGCAGGC ATAACCTATG CCCGTCTGGA AAAGGGCGGC CTGCAGTGGC CTTGCCCGGA TGTTGATCAT CCGGGCACGC CGGTGCTGCA CCGGAACGCA TTTATGCGCG GCCGGGGGGC TTTTCTTGCC GTGGAGCACC GTGAACCGGC GGAACTGCCG GATGACGCGT ATCCGCTGAT GCTTACCACC GGAAGGGTTG TTGCCCATTA TCATACCGGC ACCATGACCC GCCGCTGCTG GGGGCTGAAC GGCGTGGCCC CTGAAGAGCA GGTGGAGCTG CATCCTGACG ATGCGGCGCC TCTGGGGATA GCCGACGGCG ATATGGTGCG GCTCACTTCG CGCCGGGGCA GTATGACCGC GCGGGTGCAT GTGACCGAAA AAACCATGCG CGGTCTGGTC TTTGTCACAT TCCACTACAG CGAAAGCTGC GGCAACGTGC TGACCAACAG CGCGGCAGAC CCTGAAACAG GCACCGCGGA ACTGAAAATA TGTTCGGTGC GCGTGGAAAA AGCAGACCGG CAGGGCCCCT GTCCGGCGGA TACCGCCGGA CGGCGGCCGG AGGCGGCTGC TCAGAAACAC TATTCCGAAC CGGCGGTGCA TCCTGCCGGA ACACCGGAGA AAATATGCAA TCCCAGTTGA

Product

Productfdh
DescriptionFormate dehydrogenase
Modifications400..402,aa:Sec
MKEVLTTCPY CGTGCAFYLQ VHDDTVTGVR PAVSNTVNKG RLCSKGHFGF DFIHHGDRLK TPLIRRDGRL VPCSWEEAYD CITSRLSEII RQSGPDAVAG FSSARCTNEE NYLMQKFMRA AVGTNNVDHC ARLUHAPTVA GLAAAFGSGA MTNSIDELES MGAGDVIFAV GTNTTECHPV IGANMLQAVR QGARLVVADP RAVTLAAHAA VWLRLRPGTD VALLNGIAHV IISEGLADEA FIAQRTEGYA AFRETVLRCT PQKASAITGV PADDIRSAAR ILGCAANVST YYTMGITQHT SGVDNVRAVA NIALLTGNAG RPGTGVNPLR GQNNVQGACD MGALPDVLPA YQRVTDPAVR ERFAAAWGRE VPGKPGLRIP DVLHGLEHGT VRALYVFGEN PMRSDPDVGH VEHCLDAAEF LVVQDIFLTE TAAKAHVVLP GASFAEKDGT FSSTERRVQR IRRAVPPAGG SRPDWQILSE LLTRMGAGPE YGSPEEIFDE MRALTPSYAG ITYARLEKGG LQWPCPDVDH PGTPVLHRNA FMRGRGAFLA VEHREPAELP DDAYPLMLTT GRVVAHYHTG TMTRRCWGLN GVAPEEQVEL HPDDAAPLGI ADGDMVRLTS RRGSMTARVH VTEKTMRGLV FVTFHYSESC GNVLTNSAAD PETGTAELKI CSVRVEKADR QGPCPADTAG RRPEAAAQKH YSEPAVHPAG TPEKICNPS