Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200466"

Accession numberr200466 [export]
Locus namenull
Recode1 namefdh_s_pro_mavi
Descriptionformate dehydrogenase
Recode statusProvisional

Organism

Genomic classBacteria (Chromosome)
OrganismMycobacterium avium [details]

Sequence

GenBank IDsNP_959301.1
Sequence of 2886 nucleotides [sequence]
OrganisationSECIS (1) [see structure]

Recoding event

Event typeSelenocysteine (position: 580)
DescriptionSelenocysteine incorporation at UGA codon.
ATGGCCCCGA AAAAAGCCCT GAGCAAGGTG TTTCTGGAAT GGCCCGTGCT GCGCCAGGTG CGCTCGACGG ACAAACTCGG CCGCGGCTCG GCGGTGACCT CCAAACACAC CCGCGCGCTG GCGCCGCGCA CCGCCACCGC CGACCGGGTG GTGCAGAGCG TGTGCCCGTA CTGCGCCGTC GGCTGCGGCC AGCGGGTGTA CGTCAAGGAC GAGCGGGTCG TGGCGATCGA GGGCGACCCC GATTCGCCGA TCTCGCGAGG ACGCTTGTGC CCCAAGGGAT CTGCGAGCGA GCAGTTGGTG AACTCGCCGG GGCGGCAGCT GCAGGTGCTC TACCGCGCGC CGCGCGCCAC CGAATGGCAG CCGCTGCAGC TGGACACCGC GATCGACATG ATCGCCGACC GCTTCGTGGA ATCGCGCCGC AACAGCTGGC AGGACATCGA CAAGAAGGGC AACCTGCTGC GCCGCACCAT GGGCATCGCC GCGCTGGGCG GCGCGACCCT GGACAACGAA GAGAACTACC TCATCAAGAA GCTCTTCACC GCCGCGGGCG CCATTCAGAT CGAGAACCAA GCCCGTATTT GACACAGTGC CACGGTTCCC GGTCTGGGAG CCTCCTTCGG GCGCGGCGGC GCCACCCAAT CACTGCAAGA CATGGCCAAT GCCGACTGCA TCGTCATCCA GGGCTCCAAC ATGGCCGAGT GTCACCCGGT CGGCTTCCAA TGGGTGGAAG AGGCCCGGGC CCGCGGCGCG CGGGTGATCC ACGTCGACCC GCGATTCACC CGCACCTCGG CGGTCTCCGA CCGGCACATC CCGATCCGGG CCGGTTCGGA CGTGGTGCTG CTCGGCGCGC TGATCAACCA CGTGCTCACC AACGACCTGT GGTTCTCCGA ATACGTCGTC GCGTACACCA ACGCCGCCAC CATCATCAAC GAAAACTTCC GCGACACCGA GGATCTCGGC GGCCTGTTCT CCGGGTTCGA TCCCGAGACC GGGCAGTACG ACACGTCGAG TTGGGCCTAC GAAGAGGAGG ACGACGGCCG GTCCGGAGGC GAAATCGAGT CCCCCGGCGG CGGTCACACC CACGGCGCCA CCGCCACCCA CAGCGCCGCC GGTGACGAGC ACGGCAGCGG CGGCCCGCCG CTGGCGCACG CCAGGGTGCG CCGCGACGAG ACCCTGCAGC ACCCGCGGAC CGTCTTCCAG ATCCTCAAGC GGCACTACGC CCGCTACACG CCGGAGATGG TCAAAGACGT GTGCGGGATC AGCCGGGAGG ACTTCGACTA CCTGGCCCGC TCCATCGTGG AGAACTCCGG GCGCGAGCGC ACCACCTGCT TCGCCTACGC CGTCGGCTGG ACGCAGCACA CCCTGGGCGC CCAATTCATC CGCACCGCAA CGATTTTGCA GCTGCTGATG GGCAACGTCG GGCGCCCGGG CAGCGGCATC ATGGCGCTGC GCGGCCACGC CACCATCCAG GGCTCCACCG ACATCCCCAC GCTGTTCAAC CTGCTGCCCG GCTATCTGCC GATGCCCAAG GCGGGCGTGC ACGACACCCT GGCCGACTAC CTGGCCGCGG TGGGATCCAA GAAACAGAAG GGCTTCTGGG CCAACGCCGA CGCCTACACC GTCAGCCTGC TCAAGGCGTG GTGGGGCGAG GCGGCCACCG CGGACAACGA CTGGGCCTAC GACTACCTGC CCCGACTGAC CGGCCCGCAC GGCACCTACC AGACCGTGAT GGGCATGCTG GCCGACGAGG TCGAGGGCTA CTTCCTGCTC GGCCAGAACC CCGCGGTCGG TTCGGCGCAC GGCCGGATGC AACGGCTGGG CATGTCGCAT CTCAAGTGGC TGGTGGTGCG CGACTTCAAC CTGATCGAAT CGGCCACCTG GTGGAAGGAC GGGCCCGAAA TCGCCTCCGG GGAACTGAAA ACCGAGGAGA TCGAGACCGA GGTGTTCTTC CTGCCCGCCG CCACGCACGT GGAGAAGGCC GGATCCTTCA CGCAGACACA ACGATTGGTG CAGTGGCGGC ACCAGGCCGT CGAGCCGCCG GGACAGTGCC AGAGCGAACT GCAGTTCTTC TACGAACTCG GCAAGCGGAT CCGGCAACGG CTGGCTGGCT CGACCGACGA GCGGGACCGG CCGCTGCTGG ATCTGACCTG GGACTACCCC ACCGACGAGC ACGGCGACCC GGACGGGGAG GCGGTGCTGG CCGAGATCAA CGGATACCGG GTCGGCGAGC CCGCGGACCC GTTGGCGTCC TACACCGAGC TGCGCGCCGA CGGGTCGACC GCCGCCGGCT GCTGGATCTA CACCGGGGTG TACGCCAACG CCGTCAACCA GGCCGCGCGC CGGGTGCCCA ACGGCGGTGC GTCACCGAGC CAATCGGAGT GGGGCTGGGC GTGGCCCGCC GACCGGCGGG TGCTCTACAA CCGCGCGTCG GCCGACCCGG ACGGCAAACC GTGGAGCGAA CGCAAGCGCT ACATCTGGTG GGATCCCGAC CAGCGACGCT GGGTCGGCTA CGACGTGCCG GACTTCGTGG TCGACCGAGC CCCGGGCGCC CGGCCCGACC CCGAGCTGGG CGGCCCCGAC GCGCTGGCCG GCGACGACCC GTTCATCATG CAGGCCGACG GCAAGGGCTG GCTGTTCGCG CCCAAGGGTG TGGTCGACGG GCCGCTGCCC ACGCACTACG AGCCGCAGGA ATCGCCGGTG GCCAACGCGC TGTATCCCCA GCAGCGCAAC CCGGCGCGAA TCACCTTCGC GCGCAAGGAC AATCTCAGCG CACCCAGCGC CGGCGAGCCG GGCTCCGACG TCTACCCGTA CGTGTTCACC ACCTACCGGC TCACCGAGCA TCACACCGCC GGCGGCATGA GCCGGTGGCT GCCCTACCTC TCGGAG

Product

Productfdh
DescriptionFormate dehydrogenase
Modifications580..582,aa:Sec
MAPKKALSKV FLEWPVLRQV RSTDKLGRGS AVTSKHTRAL APRTATADRV VQSVCPYCAV GCGQRVYVKD ERVVAIEGDP DSPISRGRLC PKGSASEQLV NSPGRQLQVL YRAPRATEWQ PLQLDTAIDM IADRFVESRR NSWQDIDKKG NLLRRTMGIA ALGGATLDNE ENYLIKKLFT AAGAIQIENQ ARIUHSATVP GLGASFGRGG ATQSLQDMAN ADCIVIQGSN MAECHPVGFQ WVEEARARGA RVIHVDPRFT RTSAVSDRHI PIRAGSDVVL LGALINHVLT NDLWFSEYVV AYTNAATIIN ENFRDTEDLG GLFSGFDPET GQYDTSSWAY EEEDDGRSGG EIESPGGGHT HGATATHSAA GDEHGSGGPP LAHARVRRDE TLQHPRTVFQ ILKRHYARYT PEMVKDVCGI SREDFDYLAR SIVENSGRER TTCFAYAVGW TQHTLGAQFI RTATILQLLM GNVGRPGSGI MALRGHATIQ GSTDIPTLFN LLPGYLPMPK AGVHDTLADY LAAVGSKKQK GFWANADAYT VSLLKAWWGE AATADNDWAY DYLPRLTGPH GTYQTVMGML ADEVEGYFLL GQNPAVGSAH GRMQRLGMSH LKWLVVRDFN LIESATWWKD GPEIASGELK TEEIETEVFF LPAATHVEKA GSFTQTQRLV QWRHQAVEPP GQCQSELQFF YELGKRIRQR LAGSTDERDR PLLDLTWDYP TDEHGDPDGE AVLAEINGYR VGEPADPLAS YTELRADGST AAGCWIYTGV YANAVNQAAR RVPNGGASPS QSEWGWAWPA DRRVLYNRAS ADPDGKPWSE RKRYIWWDPD QRRWVGYDVP DFVVDRAPGA RPDPELGGPD ALAGDDPFIM QADGKGWLFA PKGVVDGPLP THYEPQESPV ANALYPQQRN PARITFARKD NLSAPSAGEP GSDVYPYVFT TYRLTEHHTA GGMSRWLPYL S

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