Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200467"

Accession numberr200467 [export]
Locus namenull
Recode1 namefdh_s_pro_plum
Descriptionformate dehydrogenase
Recode statusProvisional

Organism

Genomic classBacteria (Chromosome)
OrganismPhotorhabdus luminescens [details]

Sequence

GenBank IDsBX571875.1
SequenceDNA of 3003 nucleotides [sequence]
OrganisationSECIS (1) [see structure]

Recoding event

Event typeSelenocysteine (position: 541)
DescriptionSelenocysteine incorporation at UGA codon.
ATGGCAGGTA CAACGGTAGC AGCATTGGGC TTTGCACCAA CCGCAGCCCT TGCACAAACG CGTAATTATA AACTGTTACG TGCACGTGAA ACCCGAAATA CCTGTACATA CTGCTCTGTC GGCTGTGGGC TGTTGATGTA CAGCCTTGGC GATGGCGCAA AAAATGCGAA AGCAACTATT TTTCATATTG AAGGTGATCC TGATCACCCA GTAAACCGCG GTGCACTTTG TCCTAAAGGC GCGGGCTTGG TTGATTTTAT TCATAGCGAA AGCCGCCTGA AATATCCGGA ATATCGTGCA GCAGGTTCTG ACAAATGGCA ACGTATTACT TGGGATGAGG CATTTGATCG CATTGCTAAA CTAATGAAAG CAGACCGTGA CGCTAATTTC ATTAAAACCA ATCAAGAGGG TGTCACAGTC AATCGTTGGC TGACGACCGG TATGCTGTGT GCATCCGCTG CCAGTAACGA AACAGGTTAT CTATCGCAAA AATTTAGTCG CGCTCTCGGC ATGCTCGCCG TAGACAACCA AGCACGTGTC TGACACGGAC CAACGGTAGC AAGTCTTGCT CCAACATTTG GTCGCGGTGC GATGACCAAC CATTGGGTTG ATATCAAGAA CGCGAATCTG ATCGTCGTTA TGGGTGGTAA CGCTGCCGAA GCACATCCAG TGGGATTCCG CTGGGCAATG GAAGCCAAAA TCCATAATAA CGCTAAGTTA ATTGTGATTG ATCCGCGTTT TACCCGTACA GCATCTGTGG CGGATTTCTA TACTCCAATC CGTTCTGGTA CTGATATTGC TTTCTTGTCA GGTGTCATTT TATACCTACT GACCAACGAT AAGATTAATC ATGAATATGT CGAGGCGTAT ACCAACGCCA GTCTGATCGT GCGTGAAGAT TACTCGTTCG ATGATGGTTT GTTCAGTGGT TACGATGCAG AAAAACGTCA ATACGATAAA ACCAGTTGGA ACTATGCACT GGATGAAAAC GGCTTTGCTC AACGTGATAT CACACTTAAG CACCCACGTT GTGTATGGAA TCTGCTAAAA GAGCACGTTA GTCGTTACAC GCCAGATGTC GTCAGTAATA TTTGCGGTAC GCCAAAAGAG GACTTCCTGA AAGTCTGTGA ATATATTGCA GAAACTTGTG TTAAGGATAA GACCGCTTCT TTTCTGTACG CGCTGGGTTG GACTCAACAC TCAGTGGGTG CACAGAACAT CCGGACTATG GCAATAATCC AGCTACTGTT GGGCAATATG GGGATGGCAG GTGGCGGTGT TAATGCATTG CGGGGTCACT CGAATATTCA GGGATTGACT GATTTGGGGC TGTTGTCGCA AAGCTTGCCG GGATATCTGA CACTCCCCTC AGAGAAACAG GCTGATTTGC AAACTTACCT CCAGGCAAAT ACGCCAAAAC CAATGCGGCC GGGTCAGGTT AACTATTGGG GTAACTACCC AAAATTCTTT ATCAGTCTGA TGAAGAGTTT CTACGGAGAT AATGCCCGTA AAGATAACGA CTGGGGTTTT GACTGGCTGC CGAAATGGGA CAAAGGTTAT GACGTTCTGC AATTTTTTGA CATGATGTCG AAAGGTGAAG TGAATGGCTA TATTTGTCAG GGCTTTAACC CGGTAGCCTC TTTTCCGAAT AAAAACAAAG TCGTTGGTGC CCTGTCGAAA CTGAAATTCC TGATCACGAT CGATCCGCTT AATACTGAAA CTTCAACTTT CTGGCAGAAC CACGGTGAAT TTAATGAAGT CGATTCATCC AAAATTCAGA CAGAAGTTTT CCGCCTGCCA TGTTGCTGTT TTGCAGAGGA AAATGGCTCA ATTGTTAACT CTGGCCGCTG GTTGCAATGG CACTGGAAAG GGGCTGATGC ACCGGGAGAA GCCATCGGTG ATGGCGAAAT CCTTTCAGGA ATCTTCAAAC GTCTGCGGGA TATGTACCGC ACGGAAGGGG GTGCATCACC AGAGCCGATG CTGAGCATGA CTTGGGATTA CTTCAACCCG GACAACCCCA CATCAGAAGA GGTGGCTCAA GAGAGTAATG GCCGGGCACT GGTTGATCTG ATTGATGCTA ATGGCAACGT CATCGTGAAA CAAGGTCAGC AATTAACCTC TTTTGCGCAG CTACGTGATG ATGGCACGAC CGCCAGTGGT TGTTGGATCT TTGCTGGAAG CTGGACGCCG GAAGGTAACC AAATGGCCCG TCGTGATAAC GCAGATCCAT CAGGATTGGG TAATACGCTA GGTTGGGCAT GGGCATGGCC GTTAAACCGT CGTATTTTGT ACAATCGCGC ATCGGCTGAT CCGCAGGGTA AGCCGTGGGA CCCGAAACGT CAGTTACTGA CGTGGGATGG TACTAAGTGG GGTGGTGTCG ATACTGCTGA TTACAGCGTG GCGGCACCGG AAACGGATGT TGGTCCATTT ATCATGCAAC CGGAAGGTAT GGCACGTCTG TTTGCTATTG ATAAGATGGC TGAAGGGCCG TTCCCTGAAC ACTATGAACC TTTTGAAACA CCATTGGGGA CCAATCCATT GCATCCGAAT GTGGTATCCA ACCCGGCAGC CCGAGTGTTC AAAAGCGACT TTGAAGCAAT GGGTAAGCCA GATAAATTCC CTTATGTAGG AACGACTTAC CGCTTGACAG AGCATTTCCA CTATTGGACA AAACATGCAT TATTGAACTC GATTATCCAA CCTGAACAGT TTGTAGAAAT CGGTGAAAAA CTGGCGGAAA AGAAAGGCAT CAAACACGGT GATACCGTCA AGGTTAGCTC TAATCGTGGT TACATCAAAG CGAAAGCGGT TGTCACCAAA CGTATTCGAA CCCTGAATGT ACATGGTCGT GAAGTAGATA CTATCGGTAT TCCGATTCAT TGGGGCTTTG AAGGGGCTGC GAAGAAAGGC TTTATTGCCA ATACGTTGAC ACCATTTGTT GGGGATGCGA ACACACAAAC GCCTGAGTTC AAAGCGTTCC TGGTTAATAT AGAAAAGGTG TAA

Product

Productfdh
DescriptionFormate dehydrogenase
Modifications541..543,aa:Sec
MAGTTVAALG FAPTAALAQT RNYKLLRARE TRNTCTYCSV GCGLLMYSLG DGAKNAKATI FHIEGDPDHP VNRGALCPKG AGLVDFIHSE SRLKYPEYRA AGSDKWQRIT WDEAFDRIAK LMKADRDANF IKTNQEGVTV NRWLTTGMLC ASAASNETGY LSQKFSRALG MLAVDNQARV UHGPTVASLA PTFGRGAMTN HWVDIKNANL IVVMGGNAAE AHPVGFRWAM EAKIHNNAKL IVIDPRFTRT ASVADFYTPI RSGTDIAFLS GVILYLLTND KINHEYVEAY TNASLIVRED YSFDDGLFSG YDAEKRQYDK TSWNYALDEN GFAQRDITLK HPRCVWNLLK EHVSRYTPDV VSNICGTPKE DFLKVCEYIA ETCVKDKTAS FLYALGWTQH SVGAQNIRTM AIIQLLLGNM GMAGGGVNAL RGHSNIQGLT DLGLLSQSLP GYLTLPSEKQ ADLQTYLQAN TPKPMRPGQV NYWGNYPKFF ISLMKSFYGD NARKDNDWGF DWLPKWDKGY DVLQFFDMMS KGEVNGYICQ GFNPVASFPN KNKVVGALSK LKFLITIDPL NTETSTFWQN HGEFNEVDSS KIQTEVFRLP CCCFAEENGS IVNSGRWLQW HWKGADAPGE AIGDGEILSG IFKRLRDMYR TEGGASPEPM LSMTWDYFNP DNPTSEEVAQ ESNGRALVDL IDANGNVIVK QGQQLTSFAQ LRDDGTTASG CWIFAGSWTP EGNQMARRDN ADPSGLGNTL GWAWAWPLNR RILYNRASAD PQGKPWDPKR QLLTWDGTKW GGVDTADYSV AAPETDVGPF IMQPEGMARL FAIDKMAEGP FPEHYEPFET PLGTNPLHPN VVSNPAARVF KSDFEAMGKP DKFPYVGTTY RLTEHFHYWT KHALLNSIIQ PEQFVEIGEK LAEKKGIKHG DTVKVSSNRG YIKAKAVVTK RIRTLNVHGR EVDTIGIPIH WGFEGAAKKG FIANTLTPFV GDANTQTPEF KAFLVNIEKV

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