Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200482"

Accession numberr200482 [export]
Locus namegrdB1
Recode1 namegrdB1_s_pro_tden
Descriptionglycine reductase
Recode statusProvisional

Organism

Genomic classBacteria (Chromosome)
OrganismTreponema denticola [details]

Sequence

GenBank IDsNP_970695.1
Sequence of 1332 nucleotides [sequence]
OrganisationSECIS (1) [see structure]

Recoding event

Event typeSelenocysteine (position: 1051)
DescriptionSelenocysteine incorporation at UGA codon.
ATGATATATA AGGCTATTCA TTATATAAAT CAGTTTTATG CCGGTATAGG CGGTGAATCA TCGGCAGACT CCGGTTTTGT TGTTTTGAGA GACAAAAAGG GTCCTGCTAT CGGCTTAGAA GGCTTATGGC ATGGAAAGAT GATTGTGACA AAAGTTATTT GTTGCGGAGA TAATTATATA AATCTTGATA GGAATTTTGA AGAAGTATGT AGGCAGCTGA AAAAAATTGT AGAAGAAGAA AAACCTGATG TCTTAATTGC AGGTCCGGCA TTTAATGCCG GAAGATATGG TATGGCTTGT GCTAAAATAT GTGACTATGT TCGGAGTAAT CTGAATCTTC CATCTGTTAC GGCTATGTGG CACGAAAATC CCGCTGTTAA AATATATGTT AGAAATAATT ATATAATAAG CAGCACAGAA ACTGCTGCGG GGATGCACAA AACATTGCAG GACTTAGCTG ACCTTGCCTT AAAACTTGCT AAGAAGGAAA AAATAGGTCC TGCCCGTATT GAAGGATATT TACCGACAGG GCATCGCTAT AATGAATACC ATAAAAAAAC CGGTGCTGAA AGAGTGGTGG ATATGTTGTT GGATAAGTTA AATGGCCGGC CCTATCAAAC TGAGGTTCCC TTACGGGGGT TTGAGAGAGT TCCTCCTGCT CCGCCTATTC ATAAAATGAA CAAAACAACT ATAGCATTAT TTACTACCGG CGGATTAGTT CCTATTGGAA ACCCTGATAA ACTCAAGCAA GCCTTTGCTG AGGATTTTAA AGTCTACGAT ATTTCTAACC GCGATACCTT GCCGCAAGGG GTATATGAGT CCATTCATGG GGGATATGAT ACTACAGCAG CATCTGCAGA GCCTAATAGA TTGATTCCCT TAGATGCTTT AAGACAATGT GAAGCCGAAG GTATTATTGG GGGAATATAT CCTTACTTTG GAACGACATG CGGTGTTGGT ACAAATGTGG CTGTTAGTGA GTCCATGGGC AAGGCTTGGG CAAGGAAAAT TAAAGAAGAA GGTGTAGGTG CTGTAATTTT AACTAGTACG TGAGGAACCT GTACACGTTG CGGTGCAACG ATTTGCAAAG AATTGGATCG TGTCGGTATT CCAAACGTAC ATATAAACGC ATTTACGTCC ATATCTGAAA GTGTTGGGGC AAACCGAATT GTTTTTGGCG GTGGATTTAC TGCACCTGTA GGTAATCCTA TGCTCCCTCT TGAACGCGAG ACGGCATACA GACGTAAAAT TGTTGATAAA GCTTTAGAAG CCTTGCAAAC AGAAGTCTTA TCACCTACTG TTTTCACTGT AGACCATGAT AAGGAGGGAT AA

Product

ProductgrdB1
Descriptionglycine reductase complex selenoprotein B1
Modifications1051..1053,aa:Sec
MIYKAIHYIN QFYAGIGGES SADSGFVVLR DKKGPAIGLE GLWHGKMIVT KVICCGDNYI NLDRNFEEVC RQLKKIVEEE KPDVLIAGPA FNAGRYGMAC AKICDYVRSN LNLPSVTAMW HENPAVKIYV RNNYIISSTE TAAGMHKTLQ DLADLALKLA KKEKIGPARI EGYLPTGHRY NEYHKKTGAE RVVDMLLDKL NGRPYQTEVP LRGFERVPPA PPIHKMNKTT IALFTTGGLV PIGNPDKLKQ AFAEDFKVYD ISNRDTLPQG VYESIHGGYD TTAASAEPNR LIPLDALRQC EAEGIIGGIY PYFGTTCGVG TNVAVSESMG KAWARKIKEE GVGAVILTST UGTCTRCGAT ICKELDRVGI PNVHINAFTS ISESVGANRI VFGGGFTAPV GNPMLPLERE TAYRRKIVDK ALEALQTEVL SPTVFTVDHD KEG

Publication