Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200483"

Accession numberr200483 [export]
Locus namegrdB2
Recode1 namegrdB2_s_pro_tden
Descriptionglycine reductase
Recode statusProvisional

Organism

Genomic classBacteria (Chromosome)
OrganismTreponema denticola [details]

Sequence

GenBank IDsNP_972720.1
Sequence of 1296 nucleotides [sequence]
OrganisationSECIS (1) [see structure]

Recoding event

Event typeSelenocysteine (position: 1042)
DescriptionSelenocysteine incorporation at UGA codon.
ATGAGTAAAG TAATTGTTCA TTATATCAAT CAGTTCTTTG CCGGAAAGGG CGGAGAAGAC ATGGCTGACT ACAAACCGGA GGTTATTGAC GGAACAGCAG GTCCCGGTAC CGGAATTCAA GGTGCTTTAG GAGATGCAGG AAAGATCGTC AAGACCATTA TCTGCGGTGA TAACTTTTTT AACGAGCACG AAGAAGAAGC TGTTGCATTC GTCAAAAAAG TTCTTACAGA TACAAAAGCA GACCTTCTTA TCGCCGGTCC CGGATTTAAC GCCGGACGAT ACGGTATGGC TTGCGGTAAC GCAGCAAAGG TTGCCTTTGA GCTTGGAATC CCCGCTATTT CTGGTCTCTA TGAAGAAAAC CCCGGTTATG ATGTATTCAA AGCCTTTATG TACACAATCA AAACAGGCAA CTCTGCTGTA AGCATGAGAG AAGCTGTTCC TGCTATCGGA GCTTTGGCTA AAAAACTTTT AAAAGGCGAA CAAATTTGCT GCCCCGAAAA AGAAGGTCTC TTACCCAGAG GCGTACGCCA AAACTACTTT GCAGAAGAAA GAGGTGCAAA GAGAGCTGTT GACATGCTCA TCAAGAAGAT TAAGGGTGAA GCATTCGTAA CCGAATATCC GATGCCCGTA TTCGACAGAG TACCTCCTCA GCCTCCCGTT AAGGATATCA CCAAGGCAAA GATTGCATTG GTAACCTCAG GCGGTGTTGT ACCCAAGGGT AACCCCGACC ACATTGAAGC TTCAAATGCT TCACACTACG GCGAATATTC AATCGCAGGT ATGGCCGCTC TTTCATCAAA AGACAGCGAA ACAGCTCACG GCGGATATGA CCCGACCTAT TGTAACGCAA ACCCCAACCG AGTTCTTCCG GTAGATGTTT TGCGTGATCT CGAAAAAGAG GGAAAGATCG GAAAGCTTCA TGACAAGTAC TATACAACGG TAGGAAACGG TACCGCTGTA AAGCGTGCAA AGAAATTTGC CGAAGAAATT GTTCAAAAAC TTGTAAAAGA TGGAGTGCAG GCTGTAATTC TTACCTCTAC GTGAGGCACA TGTACTCGTT GCGGTGCAAC GATGGTTAAA GAAATCGAGA GATTCCTCCC GGTAGTACAT ATTGCAACTG TTGTTCCTAT CTCAAAGACT GTTGGTGCTA ACAGAATTGT TCCGGCTGTA GCTATTCCTC ACCCGCTCGG TGATCCTAAA ATGAACGACG CAGATGAGAA AAAACTCCGC CGATCACTTG TTGAAAAAGC ATTAAAAGCT CTTGAAACAC CTATTTCAGA GCAAACCGTT TTTTAA

Product

ProductgrdB2
Descriptionglycine reductase complex selenoprotein B2
Modifications1042..1044,aa:Sec
MSKVIVHYIN QFFAGKGGED MADYKPEVID GTAGPGTGIQ GALGDAGKIV KTIICGDNFF NEHEEEAVAF VKKVLTDTKA DLLIAGPGFN AGRYGMACGN AAKVAFELGI PAISGLYEEN PGYDVFKAFM YTIKTGNSAV SMREAVPAIG ALAKKLLKGE QICCPEKEGL LPRGVRQNYF AEERGAKRAV DMLIKKIKGE AFVTEYPMPV FDRVPPQPPV KDITKAKIAL VTSGGVVPKG NPDHIEASNA SHYGEYSIAG MAALSSKDSE TAHGGYDPTY CNANPNRVLP VDVLRDLEKE GKIGKLHDKY YTTVGNGTAV KRAKKFAEEI VQKLVKDGVQ AVILTSTUGT CTRCGATMVK EIERFLPVVH IATVVPISKT VGANRIVPAV AIPHPLGDPK MNDADEKKLR RSLVEKALKA LETPISEQTV F

Publication