Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200484"

Accession numberr200484 [export]
Locus namegrdB
Recode1 namegrdB_s_pro_csti
Descriptionglycine reductase
Recode statusValidated

Organism

Genomic classBacteria (Chromosome)
OrganismClostridium sticklandii [details]

Sequence

GenBank IDsAJ276209.1
SequenceDNA of 1311 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 1048)
DescriptionSelenocysteine incorporation at UGA codon.
ATGGGAAAAG TTAAGGTTGT ACACTATCTA AATCAATTCT TTGCTGGTAT AGGCGGAGAA GAAAAGGCAG ATACTCTTCC ACATATTGCT GAAAGTCAAC CTCCAATATC TCAACAACTT CAAAAGTTAA TTGAAGAAGA TGCTGAGATA GTAGGAGTAG TAGTTTGTGG AGATTCATAT TTCAATGAAA ATCTTGAAGA AGCTAAAGCT AAAGTTTTAG AGATGATTAA ATCTTTTAAT CCAGATATAC TAATCGCTGG CCCAGCGTTT AATGCTGGTA GATACGGAAT GGCTTGCGGA ACTGTTGTTA AGATGGTTCA AGATGAATTA AACCTAAAAG CTTTCACAGC TATGTATGAA GAAAATCCTG GTTTAGATGT ATTTAGAAAA GAAGTATATG TAATTCCTAC TTCTGATTCA GCTGCAGGTA TGAGAAAAGC TCTTCCAGCT GTAGCGAAAT TTGCAACTAA ATTAGCTAAA GGTGAAGAAA TTCTTTCTCC ACAAGAAGAT GGATACTTTG CAAGAGGAGT TCGTGTTAAC GCATTCGTAG ATGAAAGAGG ATCTATGCGT GCTGTTAAAA TGCTAGTTAA AAAGCTTAAA GGTGAAGAGT TTGAAACTGA GTATCCAATG CCAGTATTTG ATAGAGTAGC TCCAAATCCA GCAGTTAAAG ATATTACAAA AGCAAAAATT GCTTTAGTAA CTTCTGGTGG TATTGTACCT AAGCACAATC CTGATCATAT AGAGTCATCT TCAGCTTCTA AATACGGAAG ATATGATATC TCTAGCTTTG ATAAACTATC AGAAGCTGAT CATGAAACTG CACATGGTGG ATATGACCCA ACATATGCTA ATAACGAGCC AGACAGAGTT CTTCCAGTTG ATGTACTTCG TGATTTAGAA AAAGAAGGCA AAATCGGAGA ATTATTTAAA TATTTCTATA CTACAGTAGG TAATGGTACT TCTGTTGCAA ATTCTAAGCA ATTTGCTCAA GAATTCTCTA AAGAGCTTCT TGAAAACAAA GTAGATGCGG TTATCTTAAC ATCTACCTGA GGTACTTGTA CTCGTTGCGG CGCAACGATG GTTAAAGAAA TCGAGAGAGC TGGTATTCCT GTAGTTCATA TGTGTACAGT AGTTCCAATA TCTCTAACAG TTGGTGCAAA TAGAATAATT CCTACAATTG CTATTCCTCA CCCACTTGGA AATCCTGCAC TAGATGCAGC TGAAGAAAAA CAGCTTCGTA GAAAGCTTGT TGAAAAAGCT CTTAAAGCTT TAGAAACTGA AGTTGAAGAC CAAACAGTTT TTGAAGACTA A

Product

ProductgrdB
Descriptionglycine reductase complex selenoprotein B
Modifications1048..1050,aa:Sec
MGKVKVVHYL NQFFAGIGGE EKADTLPHIA ESQPPISQQL QKLIEEDAEI VGVVVCGDSY FNENLEEAKA KVLEMIKSFN PDILIAGPAF NAGRYGMACG TVVKMVQDEL NLKAFTAMYE ENPGLDVFRK EVYVIPTSDS AAGMRKALPA VAKFATKLAK GEEILSPQED GYFARGVRVN AFVDERGSMR AVKMLVKKLK GEEFETEYPM PVFDRVAPNP AVKDITKAKI ALVTSGGIVP KHNPDHIESS SASKYGRYDI SSFDKLSEAD HETAHGGYDP TYANNEPDRV LPVDVLRDLE KEGKIGELFK YFYTTVGNGT SVANSKQFAQ EFSKELLENK VDAVILTSTU GTCTRCGATM VKEIERAGIP VVHMCTVVPI SLTVGANRII PTIAIPHPLG NPALDAAEEK QLRRKLVEKA LKALETEVED QTVFED

Publication