Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200486"

Accession numberr200486 [export]
Locus namegrdF
Recode1 namegrdF_s_pro_eaci
Description47 kDa selenoprotein
Recode statusProvisional

Organism

Genomic classBacteria (Chromosome)
OrganismEubacterium acidaminophilum [details]

Sequence

GenBank IDsCAA76907.1
Sequence of 1311 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 1048)
DescriptionSelenocysteine incorporation at UGA codon.
ATGAAAAAGC TAAAGGTAGT TCACTATATA AACAACTTCT TTGCCGGAGT CGGCGGAGAG GAGAAGGCCA ACATACCTCC GGAAATGAGG GAAGGCGCAG TAGGACCAGG TATGGCTCTA GCCGCAGCTC TTGGAGATGA AGCAGAGGTT GTAGCGACAG TTATATGCGG AGACTCTTAC TACGGGGAGA ACATGGACAG CGCCAGAAAA GAAATCCTGG AGATGATAAA GGACGCACAG CCTGACGCAT TCGTAGCCGG CCCAGCATTC AACGCCGGAA GATACGGCGT GGCGTGCGGC TCTATAGCAA AGGCTGTAGA GGAGGATCTT GGCATACCAT CTGTAACTGG GATGTATGTT GAAAATCCAG GTGTTGACAT GTACAGGAAG GACATTCAAA TAATTGAAAC TGGCAACTCG GCTGCAGACC TTAGAAACTC TATGCCTAAG CTTGCAAAGC TTGTCATGAA AAAGGCAAAG GGCGAACTTG TTGGACCTCC TGAGGTGGAA GGCTACCACA TGATGGGCAT AAGGACTAAC TTCTTCCACG AAAAGAGAGG CTCAGAAAGA GCAATCGATA TGCTTGTGAA TAAATTAAAC GGCGAAAAAT TCGAGACCGA GTATCCAATG CCTGTGTTCG ACAGAGTTCC ACCAAACCCT GCCGTTAAGG ACATGTCAAA GGTCAAGGTT GCCATTGTCA CTTCTGGCGG CATAGTTCCT CATGACAACC CTGACAGAAT AGAATCTTCA AGTGCAACAA GATATGGAAT ATATGACATC ACCGGAATGG ACTCAATGTC AGCTGACGAC TTCACATCTA TACACGGCGG CTACGACAGA GCCTTTGTTG TCAAAGATCC TAACCTTGTA GTGCCTCTTG ACGTAATGAG AGACCTTGAA AGGGAAGGTG TAATAGGCGA GCTAGCCAAT TATTTTGTAT CTACTACAGG AACAGGAACG TCTGTAGGCA ACGCAAAGGG CTTTGGCGAG AGTTTTTCTA AAAAGCTTAT TGAAGACGGA GTAGGAGCAG TTATCCTGAC ATCTACCTGA GGCACTTGTA CTCGTTGCGG AGCAACGATG GTAAAAGAAA TTGAAAGAGC AGGAATACCT GTAGTACACC TTGCCACAGT AGTGCCTATA TCACTCACAA TAGGCGCCAA CAGAATAGTG CCTGCAATAG GAATACCTCA CCCTCTCGGA GATCCGGCGC TTGATGCCAA AGGCGACAAG AAGCTAAGAA GAGAGCTTGT GATGAGAGGA CTCAAGGCGC TGCAGACAGA AGTGGACGAG CAGACGGTAT TTGAAGGCTA A

Product

ProductgrdF
Description47 kDa selenoprotein
Modifications1048..1050,aa:Sec
MKKLKVVHYI NNFFAGVGGE EKANIPPEMR EGAVGPGMAL AAALGDEAEV VATVICGDSY YGENMDSARK EILEMIKDAQ PDAFVAGPAF NAGRYGVACG SIAKAVEEDL GIPSVTGMYV ENPGVDMYRK DIQIIETGNS AADLRNSMPK LAKLVMKKAK GELVGPPEVE GYHMMGIRTN FFHEKRGSER AIDMLVNKLN GEKFETEYPM PVFDRVPPNP AVKDMSKVKV AIVTSGGIVP HDNPDRIESS SATRYGIYDI TGMDSMSADD FTSIHGGYDR AFVVKDPNLV VPLDVMRDLE REGVIGELAN YFVSTTGTGT SVGNAKGFGE SFSKKLIEDG VGAVILTSTU GTCTRCGATM VKEIERAGIP VVHLATVVPI SLTIGANRIV PAIGIPHPLG DPALDAKGDK KLRRELVMRG LKALQTEVDE QTVFEG

Publication