Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200488"

Accession numberr200488 [export]
Locus namehdrA
Recode1 namehdrA_s_pro_chyd
Descriptionheterodisulfide reductase subunit A
Recode statusProvisional

Organism

Genomic classBacteria (Chromosome)
OrganismCarboxydothermus hydrogenoformans [details]

Sequence

GenBank IDsAAK00234.1
Sequence of 1701 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 301)
DescriptionSelenocysteine incorporation at UGA codon.
ATGCACGCGT ACGTAAGCTT GGATCCTCTA GAGCGGCCGC CGACTAGTGA GCTCGTCGAC CCGGGAATTG AACTGGTCAG ACGGGCTGTC TTTAAGGCTG CACGCTTGGA GCCCCTTTAC AAATCAGCCA TCGGTATCAC AAAAAAAGCC CTGGTCATCG GTGGTGGTAT TGCCGGGATT CAGGCAGCTT TGGATATTGC CGATGCCGGG TATCAGGTTA TATTGGTGGA AAAGGAGCCA ACCATTGGCG GGAAAATGGC GCACGTCGAT AAAACCTTCC CAACCTTAGA CTGTTCCAGC TGAATATCTA CCCCGAAGAT GGCGGCTGCG GCGCACGACC CAAACATTAA GCTTTATACT TATGCGGAAG TTACCGAAGT TTCCGGTTAT ATTGGTAATT TTGAAGTTAC CATTAAGCAA AAGGCCAAAT CGGTGGACCA TAATAAATGT ACCGGATGCG GTACTTGCTG GGAAAAATGT CCCACCAAAG TTGATAGTGA ATTTGACTTA GGGCTTGGTA AACGGAAAGC TATTTACATT CCTTTTGCCC AGGCGGTTCC CAATAAGCCG GTTATTGACC GTACTACCTG CCGGCAATTT ACCAAAGGCA AGTGCGGCGT TTGCCAGAAA GTTTGTCCTA CCGGTGCTGT AGATTACGAC CAGCAGGATG AATATATTAA AGAAAAAGTC GGAGCCATTA TCATGGCTAC CGGCTATGAC CTGTTTGAGT GGAAAAAAGT CTACGGTGAG TACGGTTACG GTCAGTATCC GGACGTGATT ACCGGATTAC ATTTTGAGCG GATGGCCAGT GCTTCCGGTC CTACCGGTGG CAAGATTATT CGTCCGTCCG ATGGCAAAGA GCCCAAAACG GTTGTATTTA TTAAATGCGT TGGTTCAAGG GATGACCAAA AAGGCAAGAG CTACTGCTCC CGGGCCTGCT GTATGTATAC TGCCAAGCAT GCGCACCAGG TTTTGGAAAA GATTCCCGGA GCGCAGGTGT ATATCTTCTA CATGGACGTT CGGACAGCCG GCAAGATGTA CGAAGAATTT TACGCAAAAA CCCTGGAAGA TGGTGCCCAG TACATTCGCG GGCGAGTATC GAAGATTTAT CCTTTAGGAG ATAAATTAAT TGTTCGCGGA GCTGACACCC TGGCCGGAGT TCCGGTGGAA ATTGAAGCCG ACCTGGTGGT CTTGGCCACC GCTATGGTAC CGGCCAAGGG GTCGGAGGAA ATTGCCAAAA TTGTCGGCTT TTCTTTAGAT AAAGATGGCT TCTTCCAGGA AGCTCACCCC AAGCTTGGGC CGGTGGAGAC CACTACCGGA GGCGTATTTT TAGCCGGCGC TTGCCAGGGG CCCAAGGATA TTCCGGACAC GGTAGCGCAG GCCAGTGCAG CGGCGGCCAA GGTTATCGGG CTTTTATCCA AGGATCAGTT AGCTGCCGAG CCAATCGTCA GCCAGGTTAA CGAAGCACTT TGTTCCGGTT GCGAATTATG TAAACCCATT TGTCCGTATA AGGCTATCGA CATGAAGAAG ATTACCGAAC GGGTTCACGG TAAGGTTATC GAACGCACCG TGGCAACGGT TAACACCAGT CTGTGTCAGG GTTGCGGAGC CTGTACCGTT GCCTGCCGGG TAGGAGCCCT TAACCTCAAA GGCTTTACCA ACGAACAGCT CCTGGCGGAG GTGGAAGCAA TATGTCTGTA G

Product

ProducthdrA
Descriptionheterodisulfide reductase subunit A
Modifications301..303,aa:Sec
MHAYVSLDPL ERPPTSELVD PGIELVRRAV FKAARLEPLY KSAIGITKKA LVIGGGIAGI QAALDIADAG YQVILVEKEP TIGGKMAHVD KTFPTLDCSS UISTPKMAAA AHDPNIKLYT YAEVTEVSGY IGNFEVTIKQ KAKSVDHNKC TGCGTCWEKC PTKVDSEFDL GLGKRKAIYI PFAQAVPNKP VIDRTTCRQF TKGKCGVCQK VCPTGAVDYD QQDEYIKEKV GAIIMATGYD LFEWKKVYGE YGYGQYPDVI TGLHFERMAS ASGPTGGKII RPSDGKEPKT VVFIKCVGSR DDQKGKSYCS RACCMYTAKH AHQVLEKIPG AQVYIFYMDV RTAGKMYEEF YAKTLEDGAQ YIRGRVSKIY PLGDKLIVRG ADTLAGVPVE IEADLVVLAT AMVPAKGSEE IAKIVGFSLD KDGFFQEAHP KLGPVETTTG GVFLAGACQG PKDIPDTVAQ ASAAAAKVIG LLSKDQLAAE PIVSQVNEAL CSGCELCKPI CPYKAIDMKK ITERVHGKVI ERTVATVNTS LCQGCGACTV ACRVGALNLK GFTNEQLLAE VEAICL

Publication