Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200494"

Accession numberr200494 [export]
Locus namenull
Recode1 namehysD_s_pro_gmet
DescriptionCoenzyme F420-reducing hydrogenase delta subunit
Recode statusProvisional

Organism

Genomic classBacteria (Chromosome)
OrganismGeobacter metallireducens [details]

Sequence

GenBank IDsZP_00301658.1
Sequence of 768 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 55)
DescriptionSelenocysteine incorporation at UGA codon.
ATGAGTACCG GACGAGATCA TAAACCCAGC GTAGTCGGTT TTCTGTGCAC ATGGTGAGCG TACGGCGCTG CCGACCTGGC TGGAGTTTCC AGACTGCAAT ATACAACTGA AACAAAGATT ATCCGCGTAA TGTGTACCGG CAGAGTGGAC CTGGCATTCG TGCTCAGGGC ATTCTCCAAG GGGGCGGACG GGGTGTTCAT CGGCGGCTGC TGGCCCGGCG AATGCCACTA TGTCACCGAA GGCAACTACG ATGTGCTGAA GAACGTGCAC ATCGCCAAGA AGATCCTGGA GCGGATCGGC ATCAATCCTG ACCGGCTGCG GCTCGAATGG ATCGCCGCCT CGGAGGGGAT GCGGTACGCC GAGGTGATGA ACGACTTCGG CAAGAGGCTG AAGGAACTGG GGCCGTTGGG CAAAGGGGAA GGAATAGAGC CGGGCGCCCT GAAGCTCAGG CTGGAAGCAG CCAACAAGCT GGTCCCCTAT GTGAAGCTGG TGGAACGGGA ACGGCTGCGG CAGCGCTTCA AGACGGAGCA GGAGTACACT GATTTCTTCG CCAGTGATGA GCTGAAAAAG CTCTTTGACG AACTGGTGGC AAACAAGCTG GCGGTGAGCC AGATTACGCT GCTCCTGCAG GACAAGCCCC TGAACACGGG AGAGATCGTA ACAACTCTCG GCATGAACGC ATCTGAAGTA TCACGGCACT TGAAGAGCGC GACCATGCAC GGGCTGGTCA GGTTCGACGA AGAGCTGAAG CGGTACGCAC TGGCCTGA

Product

ProducthysD
DescriptionCoenzyme F420-reducing hydrogenase delta subunit
Modifications55..57,aa:Sec
MSTGRDHKPS VVGFLCTWUA YGAADLAGVS RLQYTTETKI IRVMCTGRVD LAFVLRAFSK GADGVFIGGC WPGECHYVTE GNYDVLKNVH IAKKILERIG INPDRLRLEW IAASEGMRYA EVMNDFGKRL KELGPLGKGE GIEPGALKLR LEAANKLVPY VKLVERERLR QRFKTEQEYT DFFASDELKK LFDELVANKL AVSQITLLLQ DKPLNTGEIV TTLGMNASEV SRHLKSATMH GLVRFDEELK RYALA