Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200496"

Accession numberr200496 [export]
Locus namenull
Recode1 nameoxd_s_pro_gmet
DescriptionNADH oxidase
Recode statusProvisional

Organism

Genomic classBacteria (Chromosome)
OrganismGeobacter metallireducens [details]

Sequence

GenBank IDsNZ_AAAS02000002.1
SequenceDNA of 1356 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 133)
DescriptionSelenocysteine incorporation at UGA codon.
ATGGCCAAGG AAAAACTCGT TGTCATCGGC GGAGATGCCG CGGGGATGAG CGCCGCATCC CAGGCGAAGC GCCGCCGGCC CGAACTGGAG ATCGTCGTTT TCGAGCGAAG CCCCCACACG TCCTTTTCCG CGTGAGGGAT TCCCTACTAC GTCGGCCGGG TTGTCGACAA GGAAGAAAAG CTCGTTATCC GTTCCCCGGA AAAGTTCCGG GAGAAATATG GAATCGATGC AAGGGCCCTG CATGAGGTAG TGGAAATCGA CGCGGCACAG GGAAAGGTGC GGGTGCGCGA TCTGCAGCGC GGCGGGTCGG CGTGGGAGTC CTACGACCAG CTTCTGATCG CCACCGGCGC GGTCCCCCTC TGCCCGGACC TTCCCGGCTC CGATGCCGTT GACATCTGCG GGGTGAACAC CCTTGAAAGT GGCCTGGAGA TCCGCAGGCG TCTCGACAAG GGGGGGATGA AAAAGGGAGT TGTCGTCGGG GGCGGGTACA TCGGCCTGGA GATGGCGGAA GCGTTGGTAC GGCATGGCCT TGAGGTTTCC CTCGTCAACA GGGCACCGCA GGTCATGGGA ACCCTCGACT ACGACATGGG GGCCATGGTC TCACAGGCCC TGCGCGATGT GGGGGTCAGC CTTTATCTGG AGGAGACTCT CACCGCGTTC GAGACAAAGG GGGGGAAAGT GACCGGGGTG GTCACGGACA GGCGCACCCT GCCGGCTGAC ATCGTGATCC TCGGCCTGGG GGTGCGCCCT AACACGGCCC TTGCCTCGGC TGCCGGCATC CCCCTCGGGG AGAAGGGGTC GATCAGGGTG AACGAACGGA TGCAGACCGG CGTTGCCGGT ATCTGGGCGG CAGGGGATTG CGCCGAATCG TTCCATCTGG TGAGCCGCAA ACCCGTCCAT ATCGCCCTCG GCACCGTCGC CAACCGGCAC GGAAGGGTCG CGGGGATCAA CCTGGGGGGC GGCTATGCCA CGTTTCCCGG GGTCGTGGGG ACAGCGGTCA CAAAAATATG CCAGGTGGAG GTCGCACGGA CCGGCCTCCA GGAAGAGGAA CTCAGGGAAC TGGGGATTGA GTGGATCAGC GCCGTCATTA AGAGCCGCAC CAGGGCCGGC TACTTTCCCG GCGCAGGGGG AATAACCGTA AAGGTGTTGG CGGAACGGGG GAGCGGCCGC CTGCTGGGAG GGCAGATCGT CGGGATGGAA GGCTCGGCCA AGCGGATAGA TACCCTGGCG ACCGCCCTTC ATGCCGGTTT TACGGTGGAG GAGATGATCA ACCTGGACCT GGGCTATGCC CCCCCGTTCT CACCGGTCTG GGACCCGGTC GTAATCGCTG CCCGTGAGGT TGCAAAGGAA CTTTAG

Product

Productoxd
DescriptionNADH oxidase
Modifications133..135,aa:Sec
MAKEKLVVIG GDAAGMSAAS QAKRRRPELE IVVFERSPHT SFSAUGIPYY VGRVVDKEEK LVIRSPEKFR EKYGIDARAL HEVVEIDAAQ GKVRVRDLQR GGSAWESYDQ LLIATGAVPL CPDLPGSDAV DICGVNTLES GLEIRRRLDK GGMKKGVVVG GGYIGLEMAE ALVRHGLEVS LVNRAPQVMG TLDYDMGAMV SQALRDVGVS LYLEETLTAF ETKGGKVTGV VTDRRTLPAD IVILGLGVRP NTALASAAGI PLGEKGSIRV NERMQTGVAG IWAAGDCAES FHLVSRKPVH IALGTVANRH GRVAGINLGG GYATFPGVVG TAVTKICQVE VARTGLQEEE LRELGIEWIS AVIKSRTRAG YFPGAGGITV KVLAERGSGR LLGGQIVGME GSAKRIDTLA TALHAGFTVE EMINLDLGYA PPFSPVWDPV VIAAREVAKE L