Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200505"

Accession numberr200505 [export]
Locus nameselD
Recode1 nameselD_s_pro_gmet
Descriptionselenophosphate synthetase
Recode statusProvisional

Organism

Genomic classBacteria (Chromosome)
OrganismGeobacter metallireducens [details]

Sequence

GenBank IDsZP_00298989.1
Sequence of 1041 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 46)
DescriptionSelenocysteine incorporation at UGA codon.
GTGACTGTGA TGATCAAGCT GACATCCCTC GTAAAAGCGG CCGGCTGAGC GGCCAAGCTG GGCCCGGCGG GCCTGGAAGA CGCACTGAGC GGCATCCTGG GGAAGGGAGA CGATCCGAAC CTCCTCGTGG GGCCGGAGAC CGCCGACGAC GCGGGGGTCT ACCGGATAGG GGAGGGGCTC GCCCTGGTGG ATACGGTGGA TATCATCACC CCCCTGGTGG ATGACCCGTT CACTTTCGGC CGGATTGCGG CGGCCAACGC CCTCTCCGAT GTCTACGCCA TGGGTGGAAG GCCGGTGACC GCCATGAACC TGGCCTTCTT CCCGGCCTGC ACCCTGCCGG GACAGATCCT GGCCGACATC ATGGCCGGTG GCCTTGACGC GGTGCGGGAG GCGGGGGCCT GCCTCGTGGG GGGGCACACG GTGGAGGACC ACGAGCTGAA ATACGGTCTC TCGGTCACCG GTCTCATCAG CCCCGGGCGG ATCGTGCGCA ACTCCACGGC CCGCCCCGGC GACAGGCTCA TCCTCACCAA GCCCCTGGGG ACGGGGATAG TCTCCACGGC CATCAAGGCC GACATGGTTG CACCCGGCGT TGTCGACGAA GCGATCCGCT GGATGGCGCT CCTGAACGCT TCGGCTGCGG GGCTCATGCT GGAATGCGAG GCTTCCGCCT GCACCGATGT CACCGGTTTC GGCCTTCTGG GGCATGCCTG CGAGATGGCC CGGGGAGCCG GCGTTACCCT CGAAATCGCC CTTGACGCCG TTCCCCTCAT GGGAGGAGTC GAGGACCTTG TGGCCGATGG CCTCGTGCCG GCCGGCTGCT ACCGCAACCG CGATCACTAT ACCCCCTTAG TCTCCGTTTC CGCCGGGGCG GGAGGCCGGC TCATCCCCCT CTTCGACCCC CAGACCTCCG GGGGGCTCCT CATCACCCTT TCGCCGCAAT TCGCCGACTC CTTCCTCTCC ATGGCCCGGG ACCGAGGGCT CTTTGCCGTC GCCGTGGGTG GGGTTCTCCC TCCCCGGGAG CATGCCGTTG TCATCGCCTG A

Product

ProductselD
DescriptionSelenophosphate synthetase; catalyzes formation of selenophosphate - selenium donor in biosyntheses of Sec on tRNA
Modifications46..48,aa:Sec
VTVMIKLTSL VKAAGUAAKL GPAGLEDALS GILGKGDDPN LLVGPETADD AGVYRIGEGL ALVDTVDIIT PLVDDPFTFG RIAAANALSD VYAMGGRPVT AMNLAFFPAC TLPGQILADI MAGGLDAVRE AGACLVGGHT VEDHELKYGL SVTGLISPGR IVRNSTARPG DRLILTKPLG TGIVSTAIKA DMVAPGVVDE AIRWMALLNA SAAGLMLECE ASACTDVTGF GLLGHACEMA RGAGVTLEIA LDAVPLMGGV EDLVADGLVP AGCYRNRDHY TPLVSVSAGA GGRLIPLFDP QTSGGLLITL SPQFADSFLS MARDRGLFAV AVGGVLPPRE HAVVIA