Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200516"

Accession numberr200516 [export]
Locus namevhcD
Recode1 namevhcD_s_pro_chyd
Descriptionmethyl viologen-reducing hydrogenase
Recode statusProvisional

Organism

Genomic classBacteria (Chromosome)
OrganismCarboxydothermus hydrogenoformans [details]

Sequence

GenBank IDsAF244581.1,AF250348.1
SequenceDNA of 432 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 208)
DescriptionSelenocysteine incorporation at UGA codon.
ATGTCTGTAG AGCAAAACTT TGAGCCGAAA ATAATAGCGT TCTTTTGCAA CTGGTGTAGC TACGCCGGAG CAGACCTGGC CGGGGTTAGC CGGATGCAGT ACCCCACCAA CTTGCGGATA ATCCGGGTAC CCTGTTCCGG CCGGGTTAAT CCCCAGTTTG TCATCAAAGC TTTTCAGCGG GGCATTGATG GGGTTTTGGT ATCCGGCTGA CATCCCGGTG ACTGCCACTA TGTTAGTGGC AATTACTACA CCCGCAGAAG ATTCCTTTTA ATGAAACGGC TTTTTGAATT TATTGGTTTT GAGCCAGGGC GTTTTCATGC CCGCTGGATT TCCGGCTCGG AGGCCCAGAA AGTGGTGGAA ACTGCCAAGA AAGTTACCGA AGAGGTGCGG GCCTTAGGAC CAAACAAGAA GATGAGGGAT GACCGATGCT AA

Product

ProductvhcD
Descriptionmethyl viologen-reducing hydrogenase delta chain
Modifications208..210,aa:Sec
MSVEQNFEPK IIAFFCNWCS YAGADLAGVS RMQYPTNLRI IRVPCSGRVN PQFVIKAFQR GIDGVLVSGU HPGDCHYVSG NYYTRRRFLL MKRLFEFIGF EPGRFHARWI SGSEAQKVVE TAKKVTEEVR ALGPNKKMRD DRC

Publication