Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200517"

Accession numberr200517 [export]
Locus nameorf1a-orf1b
Recode1 namepol_m_vir_eav
Descriptionviral or mobile polyprotein
Recode statusValidated

Organism

Genomic classViral Genome (Virus)
OrganismEquine arteritis virus [details]
AcronymEAV

Sequence

GenBank IDsNC_002532
SequenceRNA of 9527 nucleotides [sequence]
OrganisationPseudoknot structure (1) [see structure]
Sequence (1)
Trans/Interaction (1)

Recoding event

Event type-1 Frameshifting (position: 5,181)
Descriptionthis is the CDS part of the sequence.
ModelsHMM
ATGGCAACCT TCTCCGCTAC TGGATTTGGA GGGAGTTTTG TTAGGGACTG GTCCCTGGAC TTACCCGACG CTTGTGAGCA TGGCGCGGGA TTGTGCTGCG AAGTGGACGG CTCCACCTTA TGCGCCGAGT GTTTTCGCGG TTGCGAAGGA ATGGAGCAAT GTCCTGGCTT GTTCATGGGA CTGTTAAAAC TGGCTTCGCC AGTTCCAGTG GGACATAAGT TCCTGATTGG TTGGTATCGA GCTGCCAAAG TCACCGGGCG TTACAATTTC CTTGAGCTGT TGCAACACCC TGCTTTCGCC CAGCTGCGTG TGGTTGATGC TAGGTTAGCC ATTGAAGAGG CAAGTGTGTT TATTTCCACT GACCACGCGT CTGCTAAGCG TTTCCCTGGC GCTAGATTTG CGCTGACACC GGTGTATGCT AACGCTTGGG TTGTGAGCCC GGCTGCTAAC AGTTTGATAG TGACCACTGA CCAGGAACAA GATGGGTTCT GCTGGTTAAA ACTTTTGCCA CCTGACCGCC GTGAGGCTGG TTTGCGGTTG TATTACAACC ATTACCGCGA ACAAAGGACC GGGTGGCTGT CTAAAACAGG ACTTCGCTTA TGGCTTGGAG ACCTGGGTTT GGGCATCAAT GCGAGCTCTG GAGGGCTGAA ATTCCACATT ATGAGGGGTT CGCCTCAGCG AGCTTGGCAT ATCACAACAC GCAGCTGCAA GCTGAAGAGC TACTACGTTT GTGACATCTC TGAAGCAGAC TGGTCCTGTT TGCCTGCTGG CAACTACGGC GGCTACAATC CACCAGGGGA CGGAGCTTGC GGTTACAGGT GCTTGGCCTT CATGAATGGC GCCACTGTTG TGTCGGCTGG TTGCAGTTCT GACTTGTGGT GTGATGATGA GTTGGCTTAT CGAGTCTTTC AATTGTCACC CACGTTCACG GTTACCATCC CAGGTGGGCG AGTTTGTCCG AATGCCAAGT ACGCAATGAT TTGTGACAAG CAGCACTGGC GCGTCAAACG TGCAAAGGGC GTCGGCCTGT GTCTCGATGA AAGCTGTTTC AGGGGCATCT GCAATTGCCA ACGCATGAGT GGACCACCAC CTGCACCCGT GTCAGCCGCC GTGTTAGATC ACATACTGGA GGCGGCGACG TTTGGCAACG TTCGCGTGGT TACACCTGAA GGGCAGCCAC GCCCCGTACC AGCGCCGCGA GTTCGTCCCA GCGCCAACTC TTCTGGAGAT GTCAAAGATC CGGCGCCCGT TCCGCCAGTA CCAAAACCAA GGACCAAGCT TGCCACACCG AACCCAACTC AGGCGCCCAT CCCAGCACCG CGCACGCGAC TTCAAGGGGC CTCAACACAG GAGCCACTGG CGAGTGCAGG AGTTGCTTCT GACTCGGCAC CTAAATGGCG TGTGGCCAAA ACTGTGTACA GCTCCGCGGA GCGCTTTCGG ACCGAACTGG TACAACGTGC TCGGTCCGTT GGGGACGTTC TTGTTCAAGC GCTACCGCTC AAAACCCCAG CAGTGCAGCG GTATACCATG ACTCTGAAGA TGATGCGTTC ACGCTTCAGT TGGCACTGCG ACGTGTGGTA CCCTTTGGCT GTAATCGCTT GTTTGCTCCC TATATGGCCA TCTCTTGCTT TGCTCCTTAG CTTTGCCATT GGGTTGATAC CCAGTGTGGG CAATAATGTT GTTCTGACAG CGCTTCTGGT TTCATCAGCT AATTATGTTG CGTCAATGGA CCATCAATGT GAAGGTGCGG CTTGCTTAGC CTTGCTGGAA GAAGAACACT ATTATAGAGC GGTCCGTTGG CGCCCGATTA CAGGCGCGCT GTCGCTTGTG CTCAATTTAC TGGGGCAGGT AGGCTATGTA GCTCGTTCCA CCTTTGATGC AGCTTATGTT CCTTGCACTG TGTTCGATCT TTGCAGCTTT GCTATTCTGT ACCTCTGCCG CAATCGTTGC TGGAGATGCT TCGGACGCTG TGTGCGAGTT GGGCCTGCCA CGCATGTTTT GGGCTCCACC GGGCAACGAG TTTCCAAACT GGCGCTCATT GATTTGTGTG ACCACTTTTC AAAGCCCACC ATCGATGTTG TGGGCATGGC AACTGGTTGG AGCGGATGTT ACACAGGAAC CGCCGCAATG GAGCGTCAGT GTGCCTCTAC GGTGGACCCT CACTCGTTCG ACCAGAAGAA GGCAGGAGCG ACTGTTTACC TCACCCCCCC TGTCAACAGC GGGTCAGCGC TGCAGTGCCT CAATGTCATG TGGAAGCGAC CAATTGGGTC CACTGTCCTT GGGGAACAAA CAGGAGCTGT TGTGACGGCG GTCAAGAGTA TCTCTTTCTC ACCTCCCTGC TGCGTCTCTA CCACTTTGCC CACCCGACCC GGTGTGACCG TTGTCGACCA TGCTCTTTAC AACCGGTTGA CTGCTTCAGG GGTCGATCCC GCTTTATTGC GTGTTGGGCA AGGTGATTTT CTAAAACTTA ATCCGGGGTT CCGGCTGATA GGTGGATGGA TTTATGGGAT ATGCTATTTT GTGTTGGTGG TTGTGTCAAC TTTTACCTGC TTACCTATCA AATGTGGCAT TGGCACCCGC GACCCTTTCT GCCGCAGAGT GTTTTCTGTA CCCGTCACCA AGACCCAAGA GCACTGCCAT GCTGGAATGT GTGCTAGCGC TGAAGGCATC TCTCTGGACT CTCTGGGGTT AACTCAGTTA CAAAGTTACT GGATCGCAGC CGTCACTAGC GGATTAGTGA TCTTGTTGGT CTGCCACCGC CTGGCCATCA GCGCCTTGGA CTTGTTGACT CTAGCTTCCC CTTTAGTGTT GCTTGTGTTC CCTTGGGCAT CTGTGGGGCT TTTACTTGCT TGCAGTCTCG CTGGTGCTGC TGTGAAAATA CAGTTGTTGG CGACGCTTTT TGTGAATCTG TTCTTTCCCC AAGCTACCCT TGTCACTATG GGATACTGGG CGTGCGTGGC GGCTTTGGCC GTTTACAGTT TGATGGGCTT GCGAGTGAAA GTGAATGTGC CCATGTGTGT GACACCTGCC CATTTTCTGC TGCTGGCGAG GTCAGCTGGA CAGTCAAGAG AGCAGATGCT CCGGGTCAGC GCTGCTGCCC CCACCAATTC ACTGCTTGGA GTGGCTCGTG ATTGTTATGT CACAGGCACA ACTCGGCTGT ACATACCCAA GGAAGGCGGG ATGGTGTTTG AAGGGCTATT CAGGTCACCG AAGGCGCGCG GCAACGTCGG CTTCGTGGCT GGTAGCAGCT ACGGCACAGG GTCAGTGTGG ACCAGGAACA ACGAGGTCGT CGTACTGACA GCGTCACACG TGGTTGGCCG CGCTAACATG GCCACTCTGA AGATCGGTGA CGCAATGCTG ACTCTGACTT TCAAAAAGAA TGGCGACTTC GCCGAGGCAG TGACGACACA GTCCGAGCTC CCAGGCAATT GGCCACAGTT GCATTTCGCC CAACCAACAA CCGGGCCCGC TTCATGGTGC ACTGCCACAG GAGATGAAGA AGGCTTGCTC AGTGGCGAGG TTTGTCTGGC GTGGACTACT AGTGGCGACT CTGGATCTGC AGTGGTTCAG GGTGACGCTG TGGTAGGGGT CCACACCGGT TCGAACACAA GTGGTGTTGC CTACGTGACC ACCCCAAGCG GAAAACTCCT TGGCGCCGAC ACCGTGACTT TGTCATCACT GTCAAAGCAT TTCACAGGCC CTTTGACATC AATCCCGAAG GACATCCCTG ACAACATTAT TGCCGATGTT GATGCTGTTC CTCGTTCTCT GGCCATGCTG ATTGATGGCT TATCCAATAG AGAGAGCAGC CTTTCTGGAC CTCAGTTGTT GTTAATTGCT TGTTTTATGT GGTCTTATCT TAACCAACCT GCTTACTTGC CTTATGTGCT GGGCTTCTTT GCCGCTAACT TCTTCCTGCC AAAAAGTGTT GGCCGCCCTG TGGTCACTGG GCTTCTATGG TTGTGCTGCC TCTTCACACC GCTTTCCATG CGCTTGTGCT TGTTCCATCT GGTCTGTGCT ACCGTCACGG GAAACGTGAT ATCTTTGTGG TTCTACATCA CTGCCGCTGG CACGTCTTAC CTTTCTGAGA TGTGGTTCGG AGGCTATCCC ACCATGTTGT TTGTGCCACG GTTCCTAGTG TACCAGTTCC CCGGCTGGGC TATTGGCACA GTACTAGCGG TATGCAGCAT CACCATGCTG GCTGCTGCCC TCGGTCACAC CCTGTTACTG GATGTGTTCT CCGCCTCAGG TCGCTTTGAC AGGACTTTCA TGATGAAATA CTTCCTGGAG GGAGGAGTGA AAGAGAGTGT CACCGCCTCA GTCACCCGCG CTTATGGCAA ACCAATTACC CAGGAGAGTC TCACTGCAAC ATTAGCTGCC CTCACTGATG ATGACTTCCA ATTCCTCTCT GATGTGCTTG ACTGTCGGGC CGTCCGATCG GCAATGAATC TGCGTGCCGC TCTCACAAGT TTTCAAGTGG CGCAGTATCG TAACATCCTT AATGCATCCT TGCAAGTCGA TCGTGACGCT GCTCGTAGTC GCAGACTAAT GGCAAAACTG GCTGATTTTG CGGTTGAACA AGAAGTAACA GCTGGAGACC GTGTTGTGGT TATCGACGGT CTGGACCGCA TGGCTCACTT CAAAGACGAT TTGGTGCTGG TTCCTTTGAC CACCAAAGTA GTAGGCGGTT CTAGGTGCAC CATTTGTGAC GTCGTTAAGG AAGAAGCCAA TGACACCCCA GTTAAGCCAA TGCCCAGCAG GAGACGCCGC AAGGGCCTGC CTAAAGGTGC TCAGTTGGAG TGGGACCGTC ACCAGGAAGA GAAGAGGAAC GCCGGTGATG ATGATTTTGC GGTCTCGAAT GATTATGTCA AGAGAGTGCC AAAGTACTGG GATCCCAGCG ACACCCGAGG CACGACAGTG AAAATCGCCG GCACTACCTA TCAGAAAGTG GTTGACTATT CAGGCAATGT GCATTACGTG GAGCATCAGG AAGATCTGCT AGACTACGTG CTGGGCAAGG GGAGCTATGA AGGCCTAGAT CAGGACAAAG TGTTGGACCT CACAAACATG CTTAAAGTGG ACCCCACGGA GCTCTCCTCC AAAGACAAAG CCAAGGCGCG TCAGCTTGCT CATCTGCTGT TGGATCTGGC TAACCCAGTT GAGGCAGTGA ATCAGTTAAA CTGAGAGCGC CCCACATCTT TCCCGGCGAT GTGGGGCGTC GGACCTTTGC TGACTCTAAA GACAAGGGTT TCGTGGCTCT ACACAGTCGC ACAATGTTTT TAGCTGCCCG GGACTTTTTA TTTAACATCA AATTTGTGTG CGACGAAGAG TTCACAAAGA CCCCAAAAGA CACACTGCTT GGGTACGTAC GCGCCTGCCC TGGTTACTGG TTTATTTTCC GTCGTACGCA CCGGTCGCTG ATTGATGCAT ACTGGGACAG TATGGAGTGC GTTTACGCGC TTCCCACCAT ATCTGATTTT GATGTGAGCC CAGGTGACGT CGCAGTGACG GGCGAGCGAT GGGATTTTGA ATCTCCCGGA GGAGGCCGTG CAAAACGTCT CACAGCTGAT CTGGTGCACG CTTTTCAAGG GTTCCACGGA GCCTCTTATT CCTATGATGA CAAGGTGGCA GCTGCTGTCA GTGGTGACCC GTATCGGTCG GACGGCGTCT TGTATAACAC CCGTTGGGGC AACATTCCAT ATTCTGTCCC AACCAATGCT TTGGAAGCCA CAGCTTGCTA CCGTGCTGGA TGTGAGGCCG TTACCGACGG GACCAACGTC ATCGCAACAA TTGGGCCCTT CCCGGAGCAA CAACCCATAC CGGACATCCC AAAGAGCGTG CTTGACAACT GCGCTGACAT CAGCTGTGAC GCTTTCATAG CGCCCGCTGC AGAGACAGCC CTGTGTGGAG ATTTAGAGAA ATACAACCTA TCCACGCAGG GTTTTGTGTT GCCTAGTGTT TTCTCCATGG TGCGGGCGTA CTTAAAAGAG GAGATTGGAG ACGCTCCACC ACTCTACTTG CCATCTACTG TACCATCTAA AAATTCACAA GCCGGAATTA ACGGCGCTGA GTTTCCTACA AAGTCTTTAC AGAGCTACTG TTTGATTGAT GACATGGTGT CACAGTCCAT GAAAAGCAAT CTACAAACCG CCACCATGGC GACTTGTAAA CGGCAATACT GTTCCAAATA CAAGATTAGG AGCATTCTGG GCACCAACAA TTACATTGGC CTAGGTTTGC GTGCCTGCCT TTCGGGGGTT ACGGCCGCAT TCCAAAAAGC TGGAAAGGAT GGGTCACCGA TTTATTTGGG CAAGTCAAAA TTCGACCCGA TACCAGCTCC TGACAAGTAC TGCCTTGAAA CAGACCTGGA GAGTTGTGAT CGCTCCACCC CGGCTTTGGT GCGTTGGTTC GCTACTAATC TTATTTTTGA GCTAGCTGGC CAGCCCGAGT TGGTGCACAG CTACGTGTTG AATTGCTGTC ACGATCTAGT TGTGGCGGGT AGTGTAGCAT TCACCAAACG CGGGGGTTTG TCATCTGGAG ACCCTATCAC TTCCATTTCC AATACCATCT ATTCATTGGT GCTGTACACC CAGCACATGT TGCTATGTGG ACTTGAAGGC TATTTCCCAG AGATTGCAGA AAAATATCTT GATGGCAGCC TGGAGCTGCG GGACATGTTC AAGTACGTTC GAGTGTACAT CTACTCGGAC GATGTGGTTC TAACCACACC CAACCAGCAT TACGCGGCCA GCTTTGACCG CTGGGTCCCC CACCTGCAGG CGCTGCTAGG TTTCAAGGTT GACCCAAAGA AAACTGTGAA CACCAGCTCC CCTTCCTTTT TGGGCTGCCG GTTCAAGCAA GTGGACGGCA AGTGTTATCT AGCCAGTCTT CAGGACCGCG TTACACGCTC TCTGTTATAC CACATTGGTG CAAAGAATCC CTCAGAGTAC TATGAAGCTG CTGTTTCCAT CTTTAAGGAC TCCATTATCT GCTGTGATGA AGACTGGTGG ACGGACCTCC ATCGACGTAT CAGTGGCGCT GCGCGTACCG ACGGAGTTGA GTTCCCCACC ATTGAAATGT TAACATCCTT CCGCACCAAG CAGTATGAGA GTGCCGTGTG CACAGTTTGT GGGGCCGCCC CCGTGGCCAA GTCTGCTTGT GGAGGGTGGT TCTGTGGCAA TTGTGTCCCG TACCACGCGG GTCATTGTCA CACAACCTCG CTCTTCGCCA ACTGCGGGCA CGACATCATG TACCGCTCCA CTTACTGCAC AATGTGTGAG GGTTCCCCAA AACAGATGGT ACCAAAAGTG CCTCACCCGA TCCTGGATCA TTTGCTGTGC CACATTGATT ACGGCAGTAA AGAGGAACTA ACTCTGGTAG TGGCGGATGG TCGAACAACA TCACCGCCCG GGCGCTACAA AGTGGGTCAC AAGGTAGTCG CCGTGGTTGC AGATGTGGGA GGCAACATTG TGTTTGGGTG CGGTCCTGGA TCACACATCG CAGTACCACT TCAGGATACG CTCAAGGGCG TGGTGGTGAA TAAAGCTCTG AAGAACGCCG CCGCCTCTGA GTACGTGGAA GGACCCCCTG GGAGTGGGAA GACTTTTCAC CTGGTCAAAG ATGTGCTAGC CGTGGTCGGT AGCGCGACCT TGGTTGTGCC CACCCACGCG TCCATGCTGG ACTGCATCAA CAAGCTCAAA CAAGCGGGCG CCGATCCATA CTTTGTGGTG CCCAAGTATA CAGTTCTTGA CTTTCCCCGG CCTGGCAGTG GAAACATCAC AGTGCGACTG CCACAGGTCG GAACCAGTGA GGGAGAAACC TTTGTGGATG AGGTGGCCTA CTTCTCACCA GTGGATCTGG CGCGCATTTT AACCCAGGGT CGAGTCAAGG GTTACGGTGA TTTAAATCAG CTCGGGTGCG TCGGACCCGC GAGCGTGCCA CGTAACCTTT GGCTCCGACA TTTTGTCAGC CTGGAGCCCT TGCGAGTGTG CCATCGATTC GGCGCTGCTG TGTGTGATTT GATCAAGGGC ATTTATCCTT ATTATGAGCC AGCTCCACAT ACCACTAAAG TGGTGTTTGT GCCAAATCCA GACTTTGAGA AAGGTGTAGT CATCACCGCC TACCACAAAG ATCGCGGTCT TGGTCACCGC ACAATTGATT CAATTCAAGG CTGTACATTC CCTGTTGTGA CTCTTCGACT GCCCACACCC CAATCACTGA CGCGCCCGCG CGCAGTTGTG GCGGTTACTA GGGCGTCTCA GGAATTATAC ATCTACGACC CCTTTGATCA GCTTAGCGGG TTGTTGAAGT TCACCAAGGA AGCAGAGGCG CAGGACTTGA TCCATGGCCC ACCTACAGCA TGCCACCTGG GCCAAGAAAT TGACCTTTGG TCCAATGAGG GCCTCGAATA TTACAAGGAA GTCAACCTGC TGTACACACA CGTCCCCATC AAGGATGGTG TAATACACAG TTACCCTAAT TGTGGCCCTG CCTGTGGCTG GGAAAAGCAA TCCAACAAAA TTTCGTGCCT CCCGAGAGTG GCACAAAATT TGGGCTACCA CTATTCCCCA GACTTACCAG GATTTTGCCC CATACCAAAA GAACTCGCTG AGCATTGGCC CGTAGTGTCC AATGATAGAT ACCCGAATTG CTTGCAAATT ACCTTACAGC AAGTATGTGA ACTCAGTAAA CCGTGCTCAG CGGGCTATAT GGTTGGACAA TCTGTTTTCG TGCAGACGCC TGGTGTGACA TCTTACTGGC TTACTGAATG GGTCGACGGC AAAGCGCGTG CTCTACCAGA TTCCTTATTC TCGTCCGGTA GGTTCGAGAC TAACAGCCGC GCTTTCCTCG ATGAAGCCGA GGAAAAGTTT GCCGCCGCTC ACCCTCATGC CTGTTTGGGA GAAATTAATA AGTCCACCGT GGGAGGATCC CACTTCATCT TTTCCCAATA TTTACCACCA TTGCTACCCG CAGACGCTGT TGCCCTGGTA GGTGCTTCAT TGGCTGGGAA AGCTGCTAAA GCTGCTTGCA GCGTTGTTGA TGTCTATGCT CCATCATTTG AACCTTATCT ACACCCTGAG ACACTGAGTC GCGTGTACAA GATTATGATC GATTTCAAGC CGTGTAGGCT TATGGTGTGG AGAAACGCGA CCTTTTATGT CCAAGAGGGT GTTGATGCAG TTACATCAGC ACTAGCAGCT GTGTCCAAAC TCATCAAAGT GCCGGCCAAT GAGCCTGTTT CATTCCATGT GGCATCAGGG TACAGAACCA ACGCGCTGGT AGCGCCCCAG GCTAAAATTT CAATTGGAGC CTACGCCGCC GAGTGGGCAC TGTCAACTGA ACCGCCACCT GCTGGTTATG CGATCGTGCG GCGATATATT GTAAAGAGGC TCCTCAGCTC AACAGAAGTG TTCTTGTGCC GCAGGGGTGT TGTGTCTTCC ACCTCAGTGC AGACCATTTG TGCACTAGAG GGATGTAAAC CTCTGTTCAA CTTCTTACAA ATTGGTTCAG TCATTGGGCC CGTGTGA

Products

Productorf1a-orf1b
Descriptionputative protease and RNA-dependent RNA polymerase.
Modifications5181..5181:ribosomal_frameshift
MATFSATGFG GSFVRDWSLD LPDACEHGAG LCCEVDGSTL CAECFRGCEG MEQCPGLFMG LLKLASPVPV GHKFLIGWYR AAKVTGRYNF LELLQHPAFA QLRVVDARLA IEEASVFIST DHASAKRFPG ARFALTPVYA NAWVVSPAAN SLIVTTDQEQ DGFCWLKLLP PDRREAGLRL YYNHYREQRT GWLSKTGLRL WLGDLGLGIN ASSGGLKFHI MRGSPQRAWH ITTRSCKLKS YYVCDISEAD WSCLPAGNYG GYNPPGDGAC GYRCLAFMNG ATVVSAGCSS DLWCDDELAY RVFQLSPTFT VTIPGGRVCP NAKYAMICDK QHWRVKRAKG VGLCLDESCF RGICNCQRMS GPPPAPVSAA VLDHILEAAT FGNVRVVTPE GQPRPVPAPR VRPSANSSGD VKDPAPVPPV PKPRTKLATP NPTQAPIPAP RTRLQGASTQ EPLASAGVAS DSAPKWRVAK TVYSSAERFR TELVQRARSV GDVLVQALPL KTPAVQRYTM TLKMMRSRFS WHCDVWYPLA VIACLLPIWP SLALLLSFAI GLIPSVGNNV VLTALLVSSA NYVASMDHQC EGAACLALLE EEHYYRAVRW RPITGALSLV LNLLGQVGYV ARSTFDAAYV PCTVFDLCSF AILYLCRNRC WRCFGRCVRV GPATHVLGST GQRVSKLALI DLCDHFSKPT IDVVGMATGW SGCYTGTAAM ERQCASTVDP HSFDQKKAGA TVYLTPPVNS GSALQCLNVM WKRPIGSTVL GEQTGAVVTA VKSISFSPPC CVSTTLPTRP GVTVVDHALY NRLTASGVDP ALLRVGQGDF LKLNPGFRLI GGWIYGICYF VLVVVSTFTC LPIKCGIGTR DPFCRRVFSV PVTKTQEHCH AGMCASAEGI SLDSLGLTQL QSYWIAAVTS GLVILLVCHR LAISALDLLT LASPLVLLVF PWASVGLLLA CSLAGAAVKI QLLATLFVNL FFPQATLVTM GYWACVAALA VYSLMGLRVK VNVPMCVTPA HFLLLARSAG QSREQMLRVS AAAPTNSLLG VARDCYVTGT TRLYIPKEGG MVFEGLFRSP KARGNVGFVA GSSYGTGSVW TRNNEVVVLT ASHVVGRANM ATLKIGDAML TLTFKKNGDF AEAVTTQSEL PGNWPQLHFA QPTTGPASWC TATGDEEGLL SGEVCLAWTT SGDSGSAVVQ GDAVVGVHTG SNTSGVAYVT TPSGKLLGAD TVTLSSLSKH FTGPLTSIPK DIPDNIIADV DAVPRSLAML IDGLSNRESS LSGPQLLLIA CFMWSYLNQP AYLPYVLGFF AANFFLPKSV GRPVVTGLLW LCCLFTPLSM RLCLFHLVCA TVTGNVISLW FYITAAGTSY LSEMWFGGYP TMLFVPRFLV YQFPGWAIGT VLAVCSITML AAALGHTLLL DVFSASGRFD RTFMMKYFLE GGVKESVTAS VTRAYGKPIT QESLTATLAA LTDDDFQFLS DVLDCRAVRS AMNLRAALTS FQVAQYRNIL NASLQVDRDA ARSRRLMAKL ADFAVEQEVT AGDRVVVIDG LDRMAHFKDD LVLVPLTTKV VGGSRCTICD VVKEEANDTP VKPMPSRRRR KGLPKGAQLE WDRHQEEKRN AGDDDFAVSN DYVKRVPKYW DPSDTRGTTV KIAGTTYQKV VDYSGNVHYV EHQEDLLDYV LGKGSYEGLD QDKVLDLTNM LKVDPTELSS KDKAKARQLA HLLLDLANPV EAVNQLNLRA PHIFPGDVGR RTFADSKDKG FVALHSRTMF LAARDFLFNI KFVCDEEFTK TPKDTLLGYV RACPGYWFIF RRTHRSLIDA YWDSMECVYA LPTISDFDVS PGDVAVTGER WDFESPGGGR AKRLTADLVH AFQGFHGASY SYDDKVAAAV SGDPYRSDGV LYNTRWGNIP YSVPTNALEA TACYRAGCEA VTDGTNVIAT IGPFPEQQPI PDIPKSVLDN CADISCDAFI APAAETALCG DLEKYNLSTQ GFVLPSVFSM VRAYLKEEIG DAPPLYLPST VPSKNSQAGI NGAEFPTKSL QSYCLIDDMV SQSMKSNLQT ATMATCKRQY CSKYKIRSIL GTNNYIGLGL RACLSGVTAA FQKAGKDGSP IYLGKSKFDP IPAPDKYCLE TDLESCDRST PALVRWFATN LIFELAGQPE LVHSYVLNCC HDLVVAGSVA FTKRGGLSSG DPITSISNTI YSLVLYTQHM LLCGLEGYFP EIAEKYLDGS LELRDMFKYV RVYIYSDDVV LTTPNQHYAA SFDRWVPHLQ ALLGFKVDPK KTVNTSSPSF LGCRFKQVDG KCYLASLQDR VTRSLLYHIG AKNPSEYYEA AVSIFKDSII CCDEDWWTDL HRRISGAART DGVEFPTIEM LTSFRTKQYE SAVCTVCGAA PVAKSACGGW FCGNCVPYHA GHCHTTSLFA NCGHDIMYRS TYCTMCEGSP KQMVPKVPHP ILDHLLCHID YGSKEELTLV VADGRTTSPP GRYKVGHKVV AVVADVGGNI VFGCGPGSHI AVPLQDTLKG VVVNKALKNA AASEYVEGPP GSGKTFHLVK DVLAVVGSAT LVVPTHASML DCINKLKQAG ADPYFVVPKY TVLDFPRPGS GNITVRLPQV GTSEGETFVD EVAYFSPVDL ARILTQGRVK GYGDLNQLGC VGPASVPRNL WLRHFVSLEP LRVCHRFGAA VCDLIKGIYP YYEPAPHTTK VVFVPNPDFE KGVVITAYHK DRGLGHRTID SIQGCTFPVV TLRLPTPQSL TRPRAVVAVT RASQELYIYD PFDQLSGLLK FTKEAEAQDL IHGPPTACHL GQEIDLWSNE GLEYYKEVNL LYTHVPIKDG VIHSYPNCGP ACGWEKQSNK ISCLPRVAQN LGYHYSPDLP GFCPIPKELA EHWPVVSNDR YPNCLQITLQ QVCELSKPCS AGYMVGQSVF VQTPGVTSYW LTEWVDGKAR ALPDSLFSSG RFETNSRAFL DEAEEKFAAA HPHACLGEIN KSTVGGSHFI FSQYLPPLLP ADAVALVGAS LAGKAAKAAC SVVDVYAPSF EPYLHPETLS RVYKIMIDFK PCRLMVWRNA TFYVQEGVDA VTSALAAVSK LIKVPANEPV SFHVASGYRT NALVAPQAKI SIGAYAAEWA LSTEPPPAGY AIVRRYIVKR LLSSTEVFLC RRGVVSSTSV QTICALEGCK PLFNFLQIGS VIGPV
Productorf1a
DescriptionRNA-dependent RNA polymerase
MATFSATGFG GSFVRDWSLD LPDACEHGAG LCCEVDGSTL CAECFRGCEG MEQCPGLFMG LLKLASPVPV GHKFLIGWYR AAKVTGRYNF LELLQHPAFA QLRVVDARLA IEEASVFIST DHASAKRFPG ARFALTPVYA NAWVVSPAAN SLIVTTDQEQ DGFCWLKLLP PDRREAGLRL YYNHYREQRT GWLSKTGLRL WLGDLGLGIN ASSGGLKFHI MRGSPQRAWH ITTRSCKLKS YYVCDISEAD WSCLPAGNYG GYNPPGDGAC GYRCLAFMNG ATVVSAGCSS DLWCDDELAY RVFQLSPTFT VTIPGGRVCP NAKYAMICDK QHWRVKRAKG VGLCLDESCF RGICNCQRMS GPPPAPVSAA VLDHILEAAT FGNVRVVTPE GQPRPVPAPR VRPSANSSGD VKDPAPVPPV PKPRTKLATP NPTQAPIPAP RTRLQGASTQ EPLASAGVAS DSAPKWRVAK TVYSSAERFR TELVQRARSV GDVLVQALPL KTPAVQRYTM TLKMMRSRFS WHCDVWYPLA VIACLLPIWP SLALLLSFAI GLIPSVGNNV VLTALLVSSA NYVASMDHQC EGAACLALLE EEHYYRAVRW RPITGALSLV LNLLGQVGYV ARSTFDAAYV PCTVFDLCSF AILYLCRNRC WRCFGRCVRV GPATHVLGST GQRVSKLALI DLCDHFSKPT IDVVGMATGW SGCYTGTAAM ERQCASTVDP HSFDQKKAGA TVYLTPPVNS GSALQCLNVM WKRPIGSTVL GEQTGAVVTA VKSISFSPPC CVSTTLPTRP GVTVVDHALY NRLTASGVDP ALLRVGQGDF LKLNPGFRLI GGWIYGICYF VLVVVSTFTC LPIKCGIGTR DPFCRRVFSV PVTKTQEHCH AGMCASAEGI SLDSLGLTQL QSYWIAAVTS GLVILLVCHR LAISALDLLT LASPLVLLVF PWASVGLLLA CSLAGAAVKI QLLATLFVNL FFPQATLVTM GYWACVAALA VYSLMGLRVK VNVPMCVTPA HFLLLARSAG QSREQMLRVS AAAPTNSLLG VARDCYVTGT TRLYIPKEGG MVFEGLFRSP KARGNVGFVA GSSYGTGSVW TRNNEVVVLT ASHVVGRANM ATLKIGDAML TLTFKKNGDF AEAVTTQSEL PGNWPQLHFA QPTTGPASWC TATGDEEGLL SGEVCLAWTT SGDSGSAVVQ GDAVVGVHTG SNTSGVAYVT TPSGKLLGAD TVTLSSLSKH FTGPLTSIPK DIPDNIIADV DAVPRSLAML IDGLSNRESS LSGPQLLLIA CFMWSYLNQP AYLPYVLGFF AANFFLPKSV GRPVVTGLLW LCCLFTPLSM RLCLFHLVCA TVTGNVISLW FYITAAGTSY LSEMWFGGYP TMLFVPRFLV YQFPGWAIGT VLAVCSITML AAALGHTLLL DVFSASGRFD RTFMMKYFLE GGVKESVTAS VTRAYGKPIT QESLTATLAA LTDDDFQFLS DVLDCRAVRS AMNLRAALTS FQVAQYRNIL NASLQVDRDA ARSRRLMAKL ADFAVEQEVT AGDRVVVIDG LDRMAHFKDD LVLVPLTTKV VGGSRCTICD VVKEEANDTP VKPMPSRRRR KGLPKGAQLE WDRHQEEKRN AGDDDFAVSN DYVKRVPKYW DPSDTRGTTV KIAGTTYQKV VDYSGNVHYV EHQEDLLDYV LGKGSYEGLD QDKVLDLTNM LKVDPTELSS KDKAKARQLA HLLLDLANPV EAVNQLN

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