Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200565"

Accession numberr200565 [export]
Locus nameprfB
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismAcidobacteria bacterium Ellin345 [details]

Sequence

VariantEllin345
GenBank IDsNC_008009.1
SequenceDNA of 1126 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 70)
DescriptionRF2 ORF0: 0.0011 ORF1: 3.1e-219
ATGTTTGAGG AACTCGAGCA GGAATACGTC GAGCTAAGCA AGAAAGTCCG TGAGCTGAAG GAGTATCTTT GACGCTCCCC GGCTCCGCAC GCAGTTGGCG GAAGTAGAAA AAGAAGCTGC CGATCCCAAC CTCTGGGGCA ATCCTGAAAA TTCTCAGCGT GTAATGCGCG AACGCAAGCG CCTGGAAGAC GCGCTCGCCA CCGACAAAGA CCTCAGCCGC CGCACGGATG ACATCACCGC CTACTTCGAC CTCGCGAAAG AAGGCGAAGA CATCACCGCC GATCTTCGCC GCGAAATGGA CCAGCTCCGC GACATCGTCG AGAAGCTCGA AACCGAAACG CTGCTCAGCG GCGACAGCGA TCGCCTCAGC GCCATCGTCA CCATCCATCC CGGTGCAGGC GGCACCGAGT CGCAGGACTG GGCCGAAATG CTGCTCCGCA TGTATCTGCG CTGGGCTGAG CGCCAAGGCT TTGAAACGAC CGTCAACGAC TACCAGCCCG GTGAAGAAGC CGGGCTGAAG TCGGTCACAA TTACCGTCGC AGGGCAGGAC GCCTACGGGC TTCTGACCAG CGAAATCGGT GTGCATCGGC TGGTGCGGAT TTCGCCGTTC GATCAGGCGA AGCGCCGTCA TACCTCGTTC GCCAGTGTCT TCGTCTCGCC GGAAATCGAC GAGAGTATTG AAGTGATCGT CAAACCGGAC GACATCCGTA CTGACACTTA CCGCTCCGGC GGCAAGGGCG GCCAGCACGT CAATACCACC GACTCAGCCG TCCGTATCAC GCACTTCCCG ACGGGCATCG TAGTGAGCTG TCAGAACGAG CGTTCGCAGC ATAAGAACCG CGAACGCGCG ATGAAGATCC TTCGCTCGAA GATCTACGAA TACGAGTTGG AAAAGAAGCG CGCCGCCTCG CAGAAAGTCG AAGACTCCAA GCTCGACATC GACTTCGGCT CGCAGATTCG TTCGTACGTC CTGCACCCGT ATCGCATGGT GAAGGACCAT CGAACGAAGT TCGAAGTTGG CGATCCCGAT CGCGTTCTAG ACGGCGACCT GAAGGGCTTC ATTCGCGCTT ACCTCCTCAT GCGCCGTTCG GAGTCCAAGG GCGGAGACTC AGCGCAATCC GCTTAG

Product

ProductprfB
DescriptionBacterial release factor 2
Modifications69..71:ribosomal_frameshift
MFEELEQEYV ELSKKVRELK EYLDAPRLRT QLAEVEKEAA DPNLWGNPEN SQRVMRERKR LEDALATDKD LSRRTDDITA YFDLAKEGED ITADLRREMD QLRDIVEKLE TETLLSGDSD RLSAIVTIHP GAGGTESQDW AEMLLRMYLR WAERQGFETT VNDYQPGEEA GLKSVTITVA GQDAYGLLTS EIGVHRLVRI SPFDQAKRRH TSFASVFVSP EIDESIEVIV KPDDIRTDTY RSGGKGGQHV NTTDSAVRIT HFPTGIVVSC QNERSQHKNR ERAMKILRSK IYEYELEKKR AASQKVEDSK LDIDFGSQIR SYVLHPYRMV KDHRTKFEVG DPDRVLDGDL KGFIRAYLLM RRSESKGGDS AQSA

Publication