Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200570"

Accession numberr200570 [export]
Locus nameprfB
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismAnaplasma phagocytophilum HZ [details]

Sequence

VariantHZ
GenBank IDsNC_007797.1
SequenceDNA of 1132 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 76)
DescriptionRF2 ORF0: 0.021 ORF1: 2.6e-208
ATGCATGGCA GGTCGGTAAT TTTAGAAGAT ATATCAGAGA TTGGTGAAGA TCTAGCTTCG ATAGCGAGGT GTCTTTGACA TTGTGGGGCT AGAATCTACG TTGGAGAGCC TGGATCTAGA GTGCTCTTCA CCTTCCTTAT GGGATGACGC TGAAAAAGCA AAAAGCTTGC TTAGTGAACG GTCGAGAGTG AGCGCCGTTC TCACATCTTT TCGTGTTTTA GAAAAAGAAC ATAAGGACTT AGCTGAACTT GCAGAGATGA TTTCTGACAG TGATGACAGA GACTTTCTTG CAACGATAAA TGCTGAGCTT CAATCCTTGA AGTTGCGTAT CTCTCAGAAA AAGACTGAGT GCATGTTCTC TCACGAAGCT GATGCTAATA GTTGTTTCTT GACTATTCGT TCTGGAGCTG GTGGAACCGA AAGTAGCGAT TGGGTTTGCA TGCTTTTACG CATGTATACA AAGTGGGCTG AATCTTTTCA TGAGTTTACT GTTGAGACTG TTGATTCTGT TGACGGTGAG GAAACAGGTC TGAAGGCTGT TACTGTGAAA ATATGTGGTA TTGGCGCCTA CGGGTGGGCA CGTACTGAAA GTGGTATTCA TAGGTTAGTT CGCATTTCTC CCTTTGACCA TGCTGCAAAA CGGCACACCA GCTTCGCTAG TGTTGAGGTA TCTCCTGTTG TGGATCATGA AATTGACATA AAAATTCTAG AAAAGGATCT TCGTATTGAT ACTTATCGTG CTTCTGGTGC TGGGGGGCAG CATGTTAATA AAACAGAAAG TGCGGTCCGT ATAACACATA TTCCCTCTGG CATGGTGGTA CAATGTCAGA CAAGCAGGTC GCAGCACCAA AACCGTGCTG AAGCCTACTC TTTACTTAAA AGCCGTCTCT ATGAAATGGA GCTGCAAGAA AAAGAGAAAA GAATGGCTCA AGATCATCAA AACAAGTGTG AAATTGGTTG GGGGCATCAG ATAAGATCCT ATGTAATGCA TCCATATCGT ATGGTGAAGG ACTTACGTAC AGGACATGAA ACTGGCAATG TAGATGCAGT AATGAATGGA GACTTAGACG CTTTTATCAC TGCGGCTCTC ATGCGTGGAT CTCTTGCCAA GGTACAGCGA TCTGGATCTT AA

Product

ProductprfB
DescriptionBacterial release factor 2
Modifications75..77:ribosomal_frameshift
MHGRSVILED ISEIGEDLAS IARCLDIVGL ESTLESLDLE CSSPSLWDDA EKAKSLLSER SRVSAVLTSF RVLEKEHKDL AELAEMISDS DDRDFLATIN AELQSLKLRI SQKKTECMFS HEADANSCFL TIRSGAGGTE SSDWVCMLLR MYTKWAESFH EFTVETVDSV DGEETGLKAV TVKICGIGAY GWARTESGIH RLVRISPFDH AAKRHTSFAS VEVSPVVDHE IDIKILEKDL RIDTYRASGA GGQHVNKTES AVRITHIPSG MVVQCQTSRS QHQNRAEAYS LLKSRLYEME LQEKEKRMAQ DHQNKCEIGW GHQIRSYVMH PYRMVKDLRT GHETGNVDAV MNGDLDAFIT AALMRGSLAK VQRSGS

Publication