Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200580"

Accession numberr200580 [export]
Locus nameprfB
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismBacillus licheniformis ATCC 14580 [details]

Sequence

VariantDSM 13; ATCC 14580
GenBank IDsNC_006270.3,NC_006322.1
SequenceDNA of 1102 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 73)
DescriptionRF2 ORF0: 7.4e-09 ORF1: 2.1e-257
ATGGAATTGG CAGAAATCAG ACAGGAACTT GAAAATATGG CTACTCGGTT AGCGGACTTC AGGGGGTCTC TTTGACCTCG AAACAAAGGA AGCAAGAATC AGCGAATTAG ACGAGCAGAT GGCTGACCCC GACTTTTGGG GAGATCAGCA GAAAGCGCAG ACGATCATTA ATGAAGCGAA TGCGTTAAAA GACTATGTCA ACACGTACAA AAGTTTAAGC GAGTCTCATG AAGAACTGCA AATGACACAT GATCTTTTAA AAGAAGATCC TGACCAGGAC CTGCAAAATG AACTGGTCAA CGAGCTGAAA AGCTTAACAA AGCAGTTTAA TGAATTTGAG CTCCAGCTAT TGTTAAGCGA GCCTTATGAT AAAAACAATG CGATCCTTGA GCTTCACCCG GGAGCCGGCG GCACCGAATC ACAGGATTGG GGTTCAATGC TTCTCAGAAT GTACACCAGG TGGGCAGAGC GCCGCGGATT CAAGGTGGAA ACCCTTGATT ACCTTCCAGG AGATGAGGCG GGAATCAAGT CTGTCACTCT CCTGATTAAA GGCCACAATG CCTACGGTTA TTTAAAAGCC GAAAAAGGCG TGCACAGGCT CGTCAGAATT TCTCCGTTTG ACTCTTCAGG GCGCAGGCAC ACGTCGTTTG TGTCTTGTGA TGTCATGCCT GAATTCAACG AAGAAATCGA CATTGAGATC CGTACGGAAG ATATTAAAGT CGATACGTAC AGGGCAAGCG GCGCCGGCGG CCAGCACGTC AATACGACAG ACTCCGCCGT CAGGATCACC CACTTGCCGA CAGGCGTCAT CGTCACTTGT CAGACAGAGC GATCACAAAT TAAAAACCGC GAACGTGCCA TGAAAATGCT GAAATCGAAG CTGTATCAGC GCAGAATCGA GGAGCAGCAG GCACAGCTGG ACGAAATTCG CGGCGAACAA AAAGAAATCG GCTGGGGAAG CCAGATCCGC TCATACGTTT TCCACCCGTA TTCTCTAGTG AAGGATCATC GAACCAACAC GGAAATGGGG AACGTGCAGG CGGTTATGGA CGGAGACATT GACTCTTTCA TTGACGCATA TTTGCGTTCC AAGCTTTCCT AA

Product

ProductprfB
DescriptionBacterial release factor 2
Modifications72..74:ribosomal_frameshift
MELAEIRQEL ENMATRLADF RGSLDLETKE ARISELDEQM ADPDFWGDQQ KAQTIINEAN ALKDYVNTYK SLSESHEELQ MTHDLLKEDP DQDLQNELVN ELKSLTKQFN EFELQLLLSE PYDKNNAILE LHPGAGGTES QDWGSMLLRM YTRWAERRGF KVETLDYLPG DEAGIKSVTL LIKGHNAYGY LKAEKGVHRL VRISPFDSSG RRHTSFVSCD VMPEFNEEID IEIRTEDIKV DTYRASGAGG QHVNTTDSAV RITHLPTGVI VTCQTERSQI KNRERAMKML KSKLYQRRIE EQQAQLDEIR GEQKEIGWGS QIRSYVFHPY SLVKDHRTNT EMGNVQAVMD GDIDSFIDAY LRSKLS

Publication