Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200588"

Accession numberr200588 [export]
Locus nameprfB
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismBaumannia cicadellinicola str. Hc (Homalodisca coagulata) [details]

Sequence

VariantHc (Homalodisca coagulata)
GenBank IDsNC_007984.1
SequenceDNA of 1012 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 76)
DescriptionRF2 ORF0: 3.3e-06 ORF1: 9.3e-197
ATGAATGAAA TTAATAATAT TAAAAATCAA ATAAAAAATC TTACAGAAAG AACAATAATT ATTCGGAGGT TACTTTGATA ATGTTAATAT TAAACAGAAT CTAGAGTATA ACATAAACAA TTTTTATGAA ATTTCTACTC AAATAGAATA TATAGAAAAA TTATTTAATT TAGCTATTAT TGAAAATGAT AGCGAAATAA TATTAGAGAT TAAAATAGAA TTAGATAATA TTGCAAATAA ACTAAAGAAA CTTGAATTTT GCTATATGTT TTCTCGTGAA AATGATAGTT CTAATTGTTA TCTTGATATT CAAGCAGGTT CTGGTGGCAT TGAAGCACAA GATTGGGCTA ATATGTTACT AAAAATGTAT TTACGTTGGT GTGAATTACA TCATTTTAAT GCTAAAGTAA TAGAAGAATC AGCAGGTGAA ATAGCGGGTA TCAAATCAGC AACTGTTTAC ATAATAGGTA ATTATGCTTA TGGTTGGTTA CGTACTGAGA CTGGTGTACA TCGTTTAGTA CGTAAGAGTC CATTTGATTC TAGTAAACGT CGTCATACAT CATTTAGTTC TGCATTTATT TATCCTGAAA TTAATAATAA TATTAATATT CAAATTAATC CTAAAGACTT ACGTATTGAT GTTTATCGTG CTTCAGGTGC TGGTGGTCAA CATGTAAACC GTACTGAATC TGCAGTACGT ATTACTCATT TACCAACTAA TATAGTAACA CAATGTCAGA ATGATCGATC ACAACATAAA AATAAAGAGC AAGCAATGAA GCAACTAAAA GCTAAAATTT ATGAATTTGA ACTACAAAAA AAAACTATGG AAAAACGTGC TAGAGAAGAC ACTAAATCTA ATATTAATTG GGGAAATCAA ATTCGTTCTT ATATATTAGA TAATTCGCGT GTAAAAGATT TACGTACTGG AATAGAAATA CGTAATATTC AAACTGTGCT TAATGGAAAT ATAGATATTT TTATAGAAGC TAGCTTAAAA GCAGGGCTAT AA

Product

ProductprfB
DescriptionBacterial release factor 2
Modifications75..77:ribosomal_frameshift
MNEINNIKNQ IKNLTERTII IRRLLDNVNI KQNLEYNINN FYEISTQIEY IEKLFNLAII ENDSEIILEI KIELDNIANK LKKLEFCYMF SRENDSSNCY LDIQAGSGGI EAQDWANMLL KMYLRWCELH HFNAKVIEES AGEIAGIKSA TVYIIGNYAY GWLRTETGVH RLVRKSPFDS SKRRHTSFSS AFIYPEINNN INIQINPKDL RIDVYRASGA GGQHVNRTES AVRITHLPTN IVTQCQNDRS QHKNKEQAMK QLKAKIYEFE LQKKTMEKRA REDTKSNINW GNQIRSYILD NSRVKDLRTG IEIRNIQTVL NGNIDIFIEA SLKAGL

Publication