Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200591"

Accession numberr200591 [export]
Locus nameprfB
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismBordetella parapertussis 12822 [details]

Sequence

Variant12822
GenBank IDsNC_002928.3
SequenceDNA of 1105 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 82)
DescriptionRF2 ORF0: 4.1e-06 ORF1: 1.2e-258
ATGGAAGCCG AACGTCAGAA CCAGCTCGTC GCCCGACTCG AAGACTACGC GGAGCGCGAA CAGGCTCTAC GGAGGTATCT TTGACTACGA TGCCAAATCG GAACGCCTGC AAGTCGTAAA CGCCGAGCTC GAAGACCCGG CCATCTGGAA CGACCCCAAG CACGCCCAGG ACCTGGGCCG TGAAAAGAAA TCCCTCGAAG ACGTCGTCGA GACCCTGACC GAATTGGGCA GCGGCCTGGC CGACTCGTGC GAGCTCGTCG AACTGGCGCT GGCCGATAGC GACGACGCCA CGCTGGAAGC CATCGAGCAC GATGTCGACC GCTTCCAGGA AAAGCTGGAA ACGCTCGAAT TCCGCCGCAT GTTCGCCAAC CCGGCCGATC CGCTGAACTG CTTCGTCGAC ATCCAGGCGG GCGCCGGCGG CACCGAAGCG CAGGACTGGG CCTCGATGCT GCTGCGCCAG TACCTCAAGT ACGCCGAGCG CAAGGGCTTC AAAGCCGAAA TCCTCGAAGA ATCCGAGGGC GACGTCGCCG GCCTGAAGTC GGCCACCATC AAGATCGAAG GCGAGTACGC ATTCGGCTAC CTGCGCACCG AAACCGGCGT GCACCGCCTG GTGCGCAAGA GCCCGTTCGA CTCCTCGGGC GGCCGCCACA CCTCGTTTGC CAGCGTATTC GTCTACCCCG AGGTCGACGA GTCCTTCGAG GTCGAGGTCA ACCCGGCCGA CCTGCGCATC GACACCTACC GCGCCAGCGG CGCGGGCGGC CAGCACATCA ACAAGACCGA CTCCGCCGTG CGCATCACGC ACGCGCCATC GGGTATCGTG GTGCAGTGCC AGAACGACCG CTCGCAGCAT CGCAACCGGG CCGAGGCGAT GCAGATGCTC AAATCCAAGC TGTACGAGCT GGAAATGCGC AACCGCATGA CCGAGCAGCA GAAGCTGGAA GATTCCAAGA CCGACGTGGG CTGGGGCCAC CAGATCCGCT CGTACGTGCT GGACCAGAGC CGCATCAAGG ACCTGCGCAC CAACGTGGAA ATTTCCAATA CCCAGAAAGT GCTCGACGGC GACCTGGACC CGTTCATCCA GGCCAGCCTC AAGCAAGGCG TGTAA

Product

ProductprfB
DescriptionBacterial release factor 2
Modifications81..83:ribosomal_frameshift
MEAERQNQLV ARLEDYAERE QALRRYLDYD AKSERLQVVN AELEDPAIWN DPKHAQDLGR EKKSLEDVVE TLTELGSGLA DSCELVELAL ADSDDATLEA IEHDVDRFQE KLETLEFRRM FANPADPLNC FVDIQAGAGG TEAQDWASML LRQYLKYAER KGFKAEILEE SEGDVAGLKS ATIKIEGEYA FGYLRTETGV HRLVRKSPFD SSGGRHTSFA SVFVYPEVDE SFEVEVNPAD LRIDTYRASG AGGQHINKTD SAVRITHAPS GIVVQCQNDR SQHRNRAEAM QMLKSKLYEL EMRNRMTEQQ KLEDSKTDVG WGHQIRSYVL DQSRIKDLRT NVEISNTQKV LDGDLDPFIQ ASLKQGV

Publication