Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200599"

Accession numberr200599 [export]
Locus nameprfB
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismBuchnera aphidicola str. Bp (Baizongia pistaciae) [details]

Sequence

VariantBp (Baizongia pistaciae)
GenBank IDsNC_004545.1
SequenceDNA of 1102 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 79)
DescriptionRF2 ORF0: 0.0004 ORF1: 1.9e-219
ATGTTTAAAA ATAATAATAT AATTAATGAT CGTATAACAA ATTTAGTTTC TCAAATAAAC AAACTTAAGA GGCGTCTTTG ATTACGATAT AAAAAAAAAT AGATTGCTAG AAATAAATAT GGAATTAAAA CTTCCTGAAA CTTGGAAACA TCCAAGTTTA ATAAAAAAAA TAAACAAAGA AAAAAATCAA TTAATATCTG TAGTAACTCA AATAACAAAA ATAGATAATG ATGTTCAAGA ATTAATTGAC ATTTTAAATT TAGAAAATTC AAATAATATA AATAGTATAT TAGATAATGT TTTATATGAA TTTAAAAACA TTGAAAAATC TATTCATGAA CTAGAAAAAT GTAGTATGTT TTTAGGTAAA TATGACTATT TGAGTTGTTA TGTAGATATA CAATCTGGAT CAGGCGGGGT GGAGGCTCAA GATTGGGCAA GCATGTTATT GCGCATGTAT GTAAGATGGG CAGAATCAAA AAAATTTAAA ATAGATATTA TTGAACAAAC ATATGGTGAA GTAGTAGGTA TAAAGTCTGC TACTATTGAG GTATTAGGGA AGTATGCATT CGGTTGGTTT CGTACTGAAA CTGGTATACA TCGTTTAGTT CGAAAAAGTC CATTTAATGC GCACCATAGA AGACATACAT CTTTTTCTTC TGTATATGTG TATCCTATTT TAGACGATGC TATTAATGTT GATATTAACA CTCGTGATTT AAAAATTGAT GTATATCGCG CTTCAGGTGC AGGAGGGCAA CATGTTAATA AAACTGAATC TGCAGTTAGA ATTAGACATT TACCTACAGG TATAGTTGTG CAATGTCAAA ATGATAGATC TCAACATAAA AATAAAGATC AAGCTATGAA ACAATTAAAA GCAAAGCTTT ATGAACAACT AATAAATGAA AAAAAATGTC AACAAAAGAT ATTAGAGAAT AATAAATTGA ATATAGGATG GGGACATCAA ATACGTTCAT ATACGTTAGA TAACTCTCGT ATTAAAGATT TAAGGACAGG TGTAGAAAGT AAAAATATTC AGTCTGTTTT AGATGGAGGA TTAGATCTAT TTGTTGAATG TAGTTTAAGA AATGGATTAT AA

Product

ProductprfB
DescriptionBacterial release factor 2
Modifications78..80:ribosomal_frameshift
MFKNNNIIND RITNLVSQIN KLKRRLDYDI KKNRLLEINM ELKLPETWKH PSLIKKINKE KNQLISVVTQ ITKIDNDVQE LIDILNLENS NNINSILDNV LYEFKNIEKS IHELEKCSMF LGKYDYLSCY VDIQSGSGGV EAQDWASMLL RMYVRWAESK KFKIDIIEQT YGEVVGIKSA TIEVLGKYAF GWFRTETGIH RLVRKSPFNA HHRRHTSFSS VYVYPILDDA INVDINTRDL KIDVYRASGA GGQHVNKTES AVRIRHLPTG IVVQCQNDRS QHKNKDQAMK QLKAKLYEQL INEKKCQQKI LENNKLNIGW GHQIRSYTLD NSRIKDLRTG VESKNIQSVL DGGLDLFVEC SLRNGL

Publication